| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0522 |
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| Symbol | |
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| ID | 5131117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 507483 |
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| End bp | 510317 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640529424 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | YP_001213985 |
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| Protein GI | 147669167 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0045705 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTCAGG AATATATAAA AATTAAAGGT GCCCGCGAAC ACAACCTCAA AAACATAGAT
GTCCAAATTC CCCGTGACAA ACTGGTGGTT GTGACCGGGC TTTCAGGGTC AGGTAAGAGC
TCTTTGGCTT TTGATACCGT TTATGCCGAA GGGCAGCGCC GCTATATGGA GTCTCTTTCC
TCTTATGCCC GCCAGTTTCT GGGCAGAATG GAAAAACCGG ACGTAGACCA TATAGAGGGG
CTTTCACCGG CTATCGCCAT TGACCAGAAA GGGGTCAGCC ACAACCCCCG TTCTACGGTA
GGCACAGTGA CTGAAATATA TGATTACTTG CGTTTGCTGT TTGCCCGTAC CGGACACCCT
CATTGCCCGG AGTGCGGCAA GGAGATTTCT GCCCAGAGCG TGGAACAGAT AACCGATGCA
GTCCAGCTGT TACCTGAGGG TGCCAAGATA CTCATTCTGG GACCGCTGGT AAGGGGACGC
AAGGGTGAGT ATACCCAGAT GTTTAAAGAC CTCCGCAAAT CAGGCTACGC CAGAGTTAGG
GTGGACGGGC AGATTAAAGA TTTGTCCGAA GATATAGAAC TGGATAAAAA CAAAAAACAT
GATATAGAAG CGGTGGTAGA CCGTCTGGTG GTTGGTCAGG CGGGCTCACA GGGACGTGTT
GCGGATTCGG TTGAAACTGC TCTGAAGCTG GGCGGGGGGC TGGTGGTAAT ATCGGTGGTG
GACGGGCAGG ATATGCTTTT TTCCGAAAAA TTTTCCTGTG CGGATTGCGG TGTAAGCCTG
GGTGAAATAG AACCCCGAAC TTTTAGTTTC AATACTCCCC ATGGCGCCTG CCAGACGTGT
ATGGGGCTGG GTGCCAAGAT GGAGCTTGAC CCTGAGCTGA TTATACCGGA CAAAAATCAG
TCTCTGGCGG ACGGGGCTAT CAGTCCTTAT CAGAACCAGA ACTGGTACTT CGGACAGGTG
GAAGATTTGG CCCGCAGGGC GGGTTTTTCG CTCAACAAGC CTGTTTCCAC TTTTACTCCT
GAACAAATGC AGTTATTGCT CTACGGTGAG GGTGGTGATA TTCATAAATA CCGCAACCGC
TACGGGCGTG TAAGGGAATA CACCAGTGGT TTTGAAGGGG TTATACCCCG TCTGGACAGA
CTTTACCGTG ATAGTGAGTC TCAGGGAGTA CGGGAGAGTA TTGAAAAATA TATGCTGGCT
AGCCCCTGTC AGGCTTGCGG CGGCAAAAGG CTTCGCAAGG AAGCCCTGTC AGTAAAGATA
GGCGAACGCA ACATTGCCGA TGTGGCGGGT ATGTCCGTAG ATGAACAGTT TAAATGGGCA
AATGAACTGG CTGGCAAAAA TACCCTGTTT AGCAAACGGG AACAGCTTAT AGCCGCCCAG
ATACTCAAAG AGATACGTTC ACGTTTGGGG TTCTTAAATA ACGTGGGTCT GGAATATCTA
ACTATAGACC GTATCGCCGG AACTTTGTCC GGCGGTGAAG CCCAGCGGAT ACGTTTGGCC
TCACAGATTG GCTCCGGCCT GATGGGGGTG CTATACGTTT GTGACGAACC TACCATAGGC
TTGCACCCGG CAGATGATAC CCGTCTGGTG GAAACCCTGC AGAAACTGCG TGATTTGGGC
AATACCATAC TGGTAGTGGA GCACGATGAA TCTGTGATGA GGGCGGCGGA CTATATTATA
GATATGGGGC CGGGGGCGGG TGAACACGGC GGGCGGGTAG TGGCTACCGG CAATATCAGC
GAAATAATGC AAAACCCGGC TTCACTTACC GGCCAGTATC TATCCGGCGC CAAGGTAATA
CCTGTGCCCG AAAAACGGCG GGATGGTAAC GGGCAGGAAC TGCTCATACA GGGTGCCCGC
CAGAATAATC TTAAAAATAT AGACGTACAT ATCCCTCTGG GCAAGCTGGT TTGCGTCAGC
GGCGTTTCCG GCAGTGGCAA GTCCACTCTG GTTACCGATA TTCTTTTCAA ACATCTGGCT
CAGGTATTTT ACGGGGCTAA AGACAGGGCC GGCGGGTCAG ATTCTATAAC CGGCACGGAG
CACATTGACA AGATAATAGA AATAAATCAG TCGCCCATCG GGCGGACACC CCGTTCAAAT
CCGGCTACCT ATACCGGGGC ATTTACCAAT ATACGGGAAT TGTTTGCGTC AGTGCCCGAA
TCCAAGGTAA AGGGTTACGG GCCGGGGCGG TTTTCATTTA ACATAAAAGG TGGACGCTGC
GAAACCTGTG GCGGAGAGGG TTATATCCAG ATAGAAATGC AATTTCTGCC GGATGTGACT
GTTCCCTGTG AAGTTTGCCA CGGGGCACGT TATAACCGCG AAGTGCTGGA GATAAAATTT
AAAGATAAAA ACATTGCAGA CGTACTGGAT ATGACAGTGG ACAGGGCGCT GGAGTTTTTT
GAAAATTTCC CCAAAATCAG CTCCAAACTG CAAACCATGC AGGATGTGGG TTTGGGGTAT
ATCCGCATAG GTCAGCCAGC ACCTACATTG TCGGGGGGTG AGGCCCAGCG TATCAAATTG
GCAACCGAAC TTTCCAAACG GGCTACCGGG CGGACTTTAT ACATACTGGA CGAACCCACT
ACAGGGCTTT CTTTTGAAGA TGTGGCGGCA CTTCTGCGGG TGCTTCAGCG GCTGGTAGAC
AGCGGCAATA CTGTGGTAGT TATTGAGCAC CAGCTGGATG TCATCAAGAA TGCAGACTGG
ATAATAGACC TAGGGCCGGG TGCAGGCATA AAAGGCGGGC AGATTGTAGC TGAGGGTATA
CCTGAAGATG TTGCCTTGAA TAAAGCCTCC GTGACCGGCA AATACCTGCG GCGGGTTTTA
CCGAAACTGA AATAG
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| Protein sequence | MAQEYIKIKG AREHNLKNID VQIPRDKLVV VTGLSGSGKS SLAFDTVYAE GQRRYMESLS
SYARQFLGRM EKPDVDHIEG LSPAIAIDQK GVSHNPRSTV GTVTEIYDYL RLLFARTGHP
HCPECGKEIS AQSVEQITDA VQLLPEGAKI LILGPLVRGR KGEYTQMFKD LRKSGYARVR
VDGQIKDLSE DIELDKNKKH DIEAVVDRLV VGQAGSQGRV ADSVETALKL GGGLVVISVV
DGQDMLFSEK FSCADCGVSL GEIEPRTFSF NTPHGACQTC MGLGAKMELD PELIIPDKNQ
SLADGAISPY QNQNWYFGQV EDLARRAGFS LNKPVSTFTP EQMQLLLYGE GGDIHKYRNR
YGRVREYTSG FEGVIPRLDR LYRDSESQGV RESIEKYMLA SPCQACGGKR LRKEALSVKI
GERNIADVAG MSVDEQFKWA NELAGKNTLF SKREQLIAAQ ILKEIRSRLG FLNNVGLEYL
TIDRIAGTLS GGEAQRIRLA SQIGSGLMGV LYVCDEPTIG LHPADDTRLV ETLQKLRDLG
NTILVVEHDE SVMRAADYII DMGPGAGEHG GRVVATGNIS EIMQNPASLT GQYLSGAKVI
PVPEKRRDGN GQELLIQGAR QNNLKNIDVH IPLGKLVCVS GVSGSGKSTL VTDILFKHLA
QVFYGAKDRA GGSDSITGTE HIDKIIEINQ SPIGRTPRSN PATYTGAFTN IRELFASVPE
SKVKGYGPGR FSFNIKGGRC ETCGGEGYIQ IEMQFLPDVT VPCEVCHGAR YNREVLEIKF
KDKNIADVLD MTVDRALEFF ENFPKISSKL QTMQDVGLGY IRIGQPAPTL SGGEAQRIKL
ATELSKRATG RTLYILDEPT TGLSFEDVAA LLRVLQRLVD SGNTVVVIEH QLDVIKNADW
IIDLGPGAGI KGGQIVAEGI PEDVALNKAS VTGKYLRRVL PKLK
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