Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0511 |
Symbol | |
ID | 5131924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 496825 |
End bp | 497856 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640529413 |
Product | DNA polymerase III, delta prime subunit |
Protein accession | YP_001213974 |
Protein GI | 147669156 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGGCGGA TAATAGGGCA GGATAAGGTA GTCTCCTTTC TGAGTAACAG CCTCAGTCAA GACAAGCTTA GCCATGCTTA TGTATTTCAT GGCCCGTCAG GGGTGGGTAA AAAGCGGATG GCTCTCACCT TTGCCCAAGC ACTAAATTGT CAGGCTTCAC CGCCCCCCTG TCAGGAATGT TCGGTTTGCG GGCGTATTTT GTCTAGAAAT CACCCTGATA TTATCCACCT GGAGCTTCTT TCGGCTGAAG ATGCGTCTGA CGGCAAAGCT AAAGCTGAAA TAGGTGTCAA ACAGATAGAA GATATCCAGC ATGCCGCCAG TTTGCCCCCA TTTGAAGGTA AGTACAAGGT TTTTATTATC CATCAGGCAG AAAAACTTTC ACTGGAGTCT TCAAACCGTC TTTTAAAAAC ACTGGAAGAA ACCGGTTCCC AAAATATATT TATTTTACTT ACCGCTGATA AATCGCTCCT GTTACCCACA GTAATTTCAC GTTGCCAGAT TCTGGAATTA AGATACGTTG AGATAAACCT TATCCGTGAG GCTCTGCTCA AGCAGGGTTT AGATGCGGAA AAAGCAGAGC TTCTGTCCCA CCTCAGTCAC GGCAGGGTGG GCTGGGCTAT GGAAGTGGCT TCGTCTCCTG AAATACTGGA AGAACGTAAG GCAAATATTG AAAAAATCAT ATGGATACTG GGGCAGGACG AAGAAGAACG CTTTGATTAT GCCTCAGATT TATCAAATCT GTTTGGTCAA AACCGCACGG CGGCTGAAGC TATACTGGAT ATGTGGCTGG ACGTATTTAG AGATATGCTT CTCCTGAAGG CTGATGCCAA CCAAAACATG ACTAATATTG ATTATAAAGA TATACTATAC ATGGCCTCAG ACAAACTTGG GCTTACAGAC ATACGTATAG CTATAGATAA TATACTCAAG ACCGAAGACC GGTTGCGGGC GAATGCCAAT CCTAGACTTT GTCTGGAAGT GCTGATGCTC AGTTTACCCT TTGTAAAGGA AGGAACTGTA AAAAATGGTT GA
|
Protein sequence | MWRIIGQDKV VSFLSNSLSQ DKLSHAYVFH GPSGVGKKRM ALTFAQALNC QASPPPCQEC SVCGRILSRN HPDIIHLELL SAEDASDGKA KAEIGVKQIE DIQHAASLPP FEGKYKVFII HQAEKLSLES SNRLLKTLEE TGSQNIFILL TADKSLLLPT VISRCQILEL RYVEINLIRE ALLKQGLDAE KAELLSHLSH GRVGWAMEVA SSPEILEERK ANIEKIIWIL GQDEEERFDY ASDLSNLFGQ NRTAAEAILD MWLDVFRDML LLKADANQNM TNIDYKDILY MASDKLGLTD IRIAIDNILK TEDRLRANAN PRLCLEVLML SLPFVKEGTV KNG
|
| |