Gene DehaBAV1_0511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0511 
Symbol 
ID5131924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand
Start bp496825 
End bp497856 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content44% 
IMG OID640529413 
ProductDNA polymerase III, delta prime subunit 
Protein accessionYP_001213974 
Protein GI147669156 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCGGA TAATAGGGCA GGATAAGGTA GTCTCCTTTC TGAGTAACAG CCTCAGTCAA 
GACAAGCTTA GCCATGCTTA TGTATTTCAT GGCCCGTCAG GGGTGGGTAA AAAGCGGATG
GCTCTCACCT TTGCCCAAGC ACTAAATTGT CAGGCTTCAC CGCCCCCCTG TCAGGAATGT
TCGGTTTGCG GGCGTATTTT GTCTAGAAAT CACCCTGATA TTATCCACCT GGAGCTTCTT
TCGGCTGAAG ATGCGTCTGA CGGCAAAGCT AAAGCTGAAA TAGGTGTCAA ACAGATAGAA
GATATCCAGC ATGCCGCCAG TTTGCCCCCA TTTGAAGGTA AGTACAAGGT TTTTATTATC
CATCAGGCAG AAAAACTTTC ACTGGAGTCT TCAAACCGTC TTTTAAAAAC ACTGGAAGAA
ACCGGTTCCC AAAATATATT TATTTTACTT ACCGCTGATA AATCGCTCCT GTTACCCACA
GTAATTTCAC GTTGCCAGAT TCTGGAATTA AGATACGTTG AGATAAACCT TATCCGTGAG
GCTCTGCTCA AGCAGGGTTT AGATGCGGAA AAAGCAGAGC TTCTGTCCCA CCTCAGTCAC
GGCAGGGTGG GCTGGGCTAT GGAAGTGGCT TCGTCTCCTG AAATACTGGA AGAACGTAAG
GCAAATATTG AAAAAATCAT ATGGATACTG GGGCAGGACG AAGAAGAACG CTTTGATTAT
GCCTCAGATT TATCAAATCT GTTTGGTCAA AACCGCACGG CGGCTGAAGC TATACTGGAT
ATGTGGCTGG ACGTATTTAG AGATATGCTT CTCCTGAAGG CTGATGCCAA CCAAAACATG
ACTAATATTG ATTATAAAGA TATACTATAC ATGGCCTCAG ACAAACTTGG GCTTACAGAC
ATACGTATAG CTATAGATAA TATACTCAAG ACCGAAGACC GGTTGCGGGC GAATGCCAAT
CCTAGACTTT GTCTGGAAGT GCTGATGCTC AGTTTACCCT TTGTAAAGGA AGGAACTGTA
AAAAATGGTT GA
 
Protein sequence
MWRIIGQDKV VSFLSNSLSQ DKLSHAYVFH GPSGVGKKRM ALTFAQALNC QASPPPCQEC 
SVCGRILSRN HPDIIHLELL SAEDASDGKA KAEIGVKQIE DIQHAASLPP FEGKYKVFII
HQAEKLSLES SNRLLKTLEE TGSQNIFILL TADKSLLLPT VISRCQILEL RYVEINLIRE
ALLKQGLDAE KAELLSHLSH GRVGWAMEVA SSPEILEERK ANIEKIIWIL GQDEEERFDY
ASDLSNLFGQ NRTAAEAILD MWLDVFRDML LLKADANQNM TNIDYKDILY MASDKLGLTD
IRIAIDNILK TEDRLRANAN PRLCLEVLML SLPFVKEGTV KNG