| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0499 |
|---|
| Symbol | |
|---|
| ID | 5131910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | - |
|---|
| Start bp | 483540 |
|---|
| End bp | 484100 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640529401 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001213962 |
|---|
| Protein GI | 147669144 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0621107 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATACACA CTCAGGGAAA GCTGACCCGG CTAAGAGACA AGCGTCTGGA AGATGCTTCG
CTTGATTATG CATGGCAAAC TGACCCTGAG TTAAGCCATC TTGATGCGGC TGAACCCCTG
ACTATATCCT TCAGAACATT TCTGGGCGAA TATATATTCG TACTGGAAAA TTCCTTATCC
CTGCGGGTGC AATTCGGCAT TGAAACCCTT CGGGGGGAAT ACATCGGCTA CTGTGCCTGC
TACAATCTGG ACATAGCCGC CAGTGAAGCC GAAGTGGGCA TAATGATTGG GCAAAAGGAA
TACTGGGGCA AGGGTTATGG CAATGACGCT CTGGGGTTGA TGATTGACTA TGTGTTTGAA
AAAACCAGTC TGAAAAGGCT TCACCTGAAA ACTCTCCAGA GCAATATCCG TGCCCAGCAA
TCATTTAGAA AATGCGGTTT TAAGCCTTGT GGAGAAAAGG AATCGGGCCT GCACCGGTTT
ATGCTGATGG GACTTTCAAA GGCAGACTGG CTAAAACACA AATCACTTCA GGCTGAAGAT
TGCCCAGCTA ATAAACTATA A
|
|---|
| Protein sequence | MIHTQGKLTR LRDKRLEDAS LDYAWQTDPE LSHLDAAEPL TISFRTFLGE YIFVLENSLS
LRVQFGIETL RGEYIGYCAC YNLDIAASEA EVGIMIGQKE YWGKGYGNDA LGLMIDYVFE
KTSLKRLHLK TLQSNIRAQQ SFRKCGFKPC GEKESGLHRF MLMGLSKADW LKHKSLQAED
CPANKL
|
|---|
| |