| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0481 |
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| Symbol | |
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| ID | 5131788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 468359 |
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| End bp | 469099 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640529383 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001213944 |
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| Protein GI | 147669126 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000089193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAATAG AATATGAGGG CACCAGATAT TCGGGTTTTC AGATTCAGGA CAAAGGTGCT
ACTATACAGG GAGAGCTGGA AACAGCTATC CGGAAATTAA CAAGTGAACA GACCAGAGTG
AGTGGTTCCG GAAGGACAGA TGCCGGGGTA CACGCGGCTT ACCAGGTAGT CAGTTACCTG
ACGGAATCTT CACTGGGGTT GGAAAAAATT AAAGGCGGGT TAAATTATTA CCTGCCGCCG
GACATAGCCG TAAAAGAAGT CCACTTTGTA GCCGAAAACT TTGATGTGAG ACGCAGGGCT
ATCAGCCGTG AGTACTCTTA CCATATATTA AATAGCAAAA CTCGCTCACC GCTTGCCAGA
CTTCAGGCCT GGCAGGTGCC TTACAAGCTG GATATAAAGC TTATGGAACA GGCTTTTAAG
ATGCTTGAAG GGGAGCATGA CTTTATCGCT TTTGCCTCCG GTCTGGGGCC GGAGATAAAG
AAAACTGTCC GCCGGGTTAA TTGGACACGG TTAGATATTG CAGAGGACAG GCTGATATTA
CGGATTGAGG CCAATTCCTT TCTTACCCAT CAGGTGAGAA ATACTATTGG AGTACTGGTG
GAACTGGGAC GCGGGACTAT TAGCATGGGC GAGTTTGGGG CATTATTTGA GGCTAAAACC
CCCGGACTGG CGGGGCCGGC AGCGCCGGCT TGTGGACTGA GCCTCGTTCG GGTAAACTAT
AGAGAACCTT TTGGGAGTTA A
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| Protein sequence | MVIEYEGTRY SGFQIQDKGA TIQGELETAI RKLTSEQTRV SGSGRTDAGV HAAYQVVSYL
TESSLGLEKI KGGLNYYLPP DIAVKEVHFV AENFDVRRRA ISREYSYHIL NSKTRSPLAR
LQAWQVPYKL DIKLMEQAFK MLEGEHDFIA FASGLGPEIK KTVRRVNWTR LDIAEDRLIL
RIEANSFLTH QVRNTIGVLV ELGRGTISMG EFGALFEAKT PGLAGPAAPA CGLSLVRVNY
REPFGS
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