| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0476 |
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| Symbol | rpsM |
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| ID | 5131825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 465485 |
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| End bp | 465874 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640529378 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001213939 |
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| Protein GI | 147669121 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000389275 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTCGCA TAGCGGGTAC AGATATACCC GATAACAAAC AGGTTTATTT CTCGTTGCAG
TATATATTCG GTATCGGCCC TGCTCGCAGT GAGAAAGTAC TTGTTCAGGC GGGTGTGGAT
AAAACGATTC GGGTTAATAA ACTGACCGAT GAGGAAATCA ACCGCCTTAG GGAAATTATA
GATAAAGAGT ATCGGGTAGA AGGGGATCTT CGCAAGGAAA TTACCCTCAA TATCAAGCGG
CTTATTGATA TTGGCTGTTA CCGTGGTATT CGCCATAAGC ACAATTTGCC GGTACGTGGC
CAGCGCACCA AAACTAATGC CCGTACTCGT CGTGGCCCGC GCAAGACTGT GGCAGGGCGT
GGACAAAAAC GTGGCGCAAC TAAGAAATAA
|
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| Protein sequence | MVRIAGTDIP DNKQVYFSLQ YIFGIGPARS EKVLVQAGVD KTIRVNKLTD EEINRLREII
DKEYRVEGDL RKEITLNIKR LIDIGCYRGI RHKHNLPVRG QRTKTNARTR RGPRKTVAGR
GQKRGATKK
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