| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0471 |
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| Symbol | secY |
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| ID | 5131190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 462363 |
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| End bp | 463679 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640529373 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001213934 |
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| Protein GI | 147669116 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00922913 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCAGA AATCGAGTAG ACCACGCCTC TTGCAGGCGA TGATTGACGC TTTCAGCTTG
CCTGATCTAA GGCGTCGGTT GCTGATTACT TTGGGGATAT TGATTGCGGC ACGTTTCATT
GCACATGTGC CGCTTCCTGG CGTTGATTCA GTTGCGCTTC AGGAATTGTT TGACCAGAAT
GGAGCGCTGG GTATGCTGGA TCTGTTTTCC GGCGGTGCCA TGCGCTATTT CAGTGTGGCG
GCTTTGGGTG TCTACCCTTA CATCACCGCT TCCATTATTA TGACTTTGCT TACGCCGGTT
ATCCCAAAAC TTTCCGCACT TTCCAAAGAG GGTGATGCCG GGCGTAACAA GATTAACACC
ATAACCCACT GGTTGGCAGT ACCGACGGCT GCTTTGGCCG GTTACAGCCA GTTGCTTCTT
CTCCAGAGGG AAGGAGCGGT GGCTCAAACT GAGCCTTTAG CGGCAATTGC CATTGTGCTC
TCAATTGTGG CCGGTACCAT GTTTATGGTC TGGCTGGGCG AACAGATTAC CAGCTATGGC
ATAGGTAATG GTATTTCTCT GATTATCTTC GCCGGTATCG TAGCCGGTCT GCCGGATATG
ATTGGGCGGG GTTTGATGGC TTCTGACCAG TTTGCAGGTT TGGCCGTATA TGCCTTTATG
GCTCTTTTGA CTACAGTTTT GATAGTTATC TTTACTGAAG CACACCGCAG AATCCCTGTT
CAGTATGCCC AGACTGTTAT CCGCAGCGGC AAAATGTATA GGCGTGGCGG CGAGAGCCAC
ATACCCTTGC GGGTTAACTC TGCCGGTATG ATCCCCCTCA TTTTTGCCTC TGCTTTGGTA
ATGCTACCGG GTTTGGTGGC CAGTTATTTC ATGGCAGGGT CAACTGCCGA ACCGAATTTT
TGGAATAGTG TTTACACTAT ATTCAGCTCT ACTGCCTCCA TGCCAGGAGG GTTGGTATAC
TGGAGTCTTT ACTTCTTTAT GACTATAATC TTCGCCTTCT TCTACACCAT GGTGACTTTT
GAACAGCAGG ATATACCCGT TACTCTCCAG AGGCAGGGCG GTTTTGTGCC CGGCATTCGT
CCCGGCAAAA TGACCGACCA ATACCTGAGC GGTGTTATCG GTCGGATTAC TTGGGCTGGT
GCGCTGTTCC TTGGCTTTGT GGCTATTATG CCCTTTCTTG CCCGTGAAGT CACCGGTATA
CAGGTTATTC AGCTGTCCAG TTTTGGTATG CTGATTGTGG TTGGTGTAGC CCTGGATACT
ATGAAGCAGC TCGAAGCGCA GCTTGTAATG CGGCGTTACG AGGGCTTTAT TAAGTAG
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| Protein sequence | MRQKSSRPRL LQAMIDAFSL PDLRRRLLIT LGILIAARFI AHVPLPGVDS VALQELFDQN
GALGMLDLFS GGAMRYFSVA ALGVYPYITA SIIMTLLTPV IPKLSALSKE GDAGRNKINT
ITHWLAVPTA ALAGYSQLLL LQREGAVAQT EPLAAIAIVL SIVAGTMFMV WLGEQITSYG
IGNGISLIIF AGIVAGLPDM IGRGLMASDQ FAGLAVYAFM ALLTTVLIVI FTEAHRRIPV
QYAQTVIRSG KMYRRGGESH IPLRVNSAGM IPLIFASALV MLPGLVASYF MAGSTAEPNF
WNSVYTIFSS TASMPGGLVY WSLYFFMTII FAFFYTMVTF EQQDIPVTLQ RQGGFVPGIR
PGKMTDQYLS GVIGRITWAG ALFLGFVAIM PFLAREVTGI QVIQLSSFGM LIVVGVALDT
MKQLEAQLVM RRYEGFIK
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