| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0465 |
|---|
| Symbol | rpsH |
|---|
| ID | 5131194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 459887 |
|---|
| End bp | 460282 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640529367 |
|---|
| Product | 30S ribosomal protein S8 |
|---|
| Protein accession | YP_001213928 |
|---|
| Protein GI | 147669110 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0096] Ribosomal protein S8 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000455878 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCTG ATCCGATTGC AGATATGTTA ACAAGAATAC GAAATGGCGT AATGGCCAGA
CACGAGGTAG TAATCATGCC GGCTTCCCGG ATGAAACAGT ACCTTGCCAA GGTCATGAAA
CAAGAAGGCT TTATTGCCGG TTATGAAGTG ATTGGCGCCA AGCCCAAACG TCAGCTGAAA
ATAGTTCTTC GCTATGACGA AGGTGGTGCT TCCTTCGTCA GCGGGCTGGA AAGAATCAGC
AAGCCCGGTC TTCGGGTTTA CGTACAGCGG GGCGAAATCC CCCGTGTTTA CGGCGGTTTG
GGTGTTGCCA TTGTCTCCAC CTCAAAGGGT GTTATGACTG GTTCACAGGC CTGGCGCCAG
GGGCTCGGTG GCGAGCTGCT TTGCAAAGTC TGGTAA
|
|---|
| Protein sequence | MISDPIADML TRIRNGVMAR HEVVIMPASR MKQYLAKVMK QEGFIAGYEV IGAKPKRQLK
IVLRYDEGGA SFVSGLERIS KPGLRVYVQR GEIPRVYGGL GVAIVSTSKG VMTGSQAWRQ
GLGGELLCKV W
|
|---|
| |