Gene DehaBAV1_0452 details

Gene Information

• Locus tag: DehaBAV1_0452
• Symbol: rplD
• ID: 5131205
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 454212
• End bp: 454844
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640529354
• Product: 50S ribosomal protein L4
• Protein accession: YP_001213915
• Protein GI: 147669097
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.000515236
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAAATTC CTGTTTATAA CGCATCCGGA GAAATCGTAA AGAATATCAA TATCAGTGAA 
GACGTCTTTG GCGTACCCTT CAATGAAGCT CTGGTTCATC AGGCTTTTGT AGCCCAGCAG 
GCGAATGCCC GCCAGGGTAC TCAGTCAACT AAGACCAGAG GTGAAGTTCA GGGTTCAAGC 
CGCAAGATAT ATCGTCAGAA GGGTACCGGT AATGCCCGCA TGGGTACCAA CCGCTCACCC 
GTCAGGCGGC ACGGCGGCGT GGCCTTTGGT CCTCGCCCCA GAGACTTCAG CAAGGATCTT 
CCCAAAAAGA TGCGCCGTCA GGCCATCAGG TGTGTGTTGT CCTTTAAGCT GGAGAGCGGC 
GAACTGAAGG TTATTGACCA ACTTAGCTTT GATGAACCTA AAACCAGAGA TATGGCAAAA 
ATACTGACAG CTCTTCAGGT AATCTCGCCC ACTCTTATAG CGGTGGATAA TCCTGATACC 
AATTTTATCA AGTCTGCTCG CAATATACCG GCAGTCAAGA CCACTCCGGC TAATTTGTTG 
AACATATCTG ATATGCTCAA GAATAAGCAA CTGGTTATGA CTGAAGAAGC GGTACGTCAG 
GTTGAAGAAC TCTGGGGTCA GCGCTCAGGC TAA 

 

Protein sequence

MEIPVYNASG EIVKNINISE DVFGVPFNEA LVHQAFVAQQ ANARQGTQST KTRGEVQGSS 
RKIYRQKGTG NARMGTNRSP VRRHGGVAFG PRPRDFSKDL PKKMRRQAIR CVLSFKLESG 
ELKVIDQLSF DEPKTRDMAK ILTALQVISP TLIAVDNPDT NFIKSARNIP AVKTTPANLL 
NISDMLKNKQ LVMTEEAVRQ VEELWGQRSG