| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0450 |
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| Symbol | rpsJ |
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| ID | 5132327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 453275 |
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| End bp | 453583 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640529352 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_001213913 |
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| Protein GI | 147669095 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000251072 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAC AAAAAATCAG GATAAAACTC AAGGGCTTTG ACCACAAGAT TCTGGATCAG
TCTGCGTTGC AGATTGTAGA GGCTCTGGAA CGGACAGGGG CTACTATATC AGGGCCGGTT
CCTCTGCCTA CCCGTATCCA GCGTTACAGT GTCATACGCG CATCCTTTAT TGATAAGGAT
TCACAGGAAC AGTTTGAGAT AAGGACTCAT AAACGTCTTA TAGACATAGT GGAAACTACA
TCTAAGACTA TTGATGCCTT AACCAATCTG AACCTCCCAG CTGGCGTAAG CATAGATATT
AAACTTTAG
|
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| Protein sequence | MAKQKIRIKL KGFDHKILDQ SALQIVEALE RTGATISGPV PLPTRIQRYS VIRASFIDKD
SQEQFEIRTH KRLIDIVETT SKTIDALTNL NLPAGVSIDI KL
|
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