Gene DehaBAV1_0447 details

Gene Information

• Locus tag: DehaBAV1_0447
• Symbol: rpsL
• ID: 5131130
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 450195
• End bp: 450629
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640529349
• Product: 30S ribosomal protein S12
• Protein accession: YP_001213910
• Protein GI: 147669092
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0048] Ribosomal protein S12
• TIGRFAM ID: [TIGR00981] ribosomal protein S12, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000000945225
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAACGG TTAATCAGCT AGTAAGAAAA GGGCGCACAA GTGCGGCCAA GAAGTACAAG 
GCACCTGCGC TGCATTACAG TTTCAATTCT CTGCGCAACA AGGTAGCTTT CGGTGATGGC 
TCTCCCCAGA AAAGGGGCGT CTGCACCCAG GTAAAAACCA CTACTCCTAA AAAGCCGAAT 
TCGGCTTTGC GCAAGATTGC CAGAGTAAGG CTGAGCAACC ATATGGAAGT TACTGCTTAT 
ATCCCCGGTG AAGGCCATAA TCTTCAGGAA CACTCTGTGG TTCTGATACG TGGCGGCCGT 
GTGCCTGACC TACCGGGTGT TCGTTATCAC ATCATTCGCG GTACTCTTGA TACCGCTGGT 
GTGGCAAATC GGCAGCAGGG TCGCAGCAGA TACGGCGCCA AAAAAGGCAA AGCCGCTCCT 
GCCAAGAAGA AATAA 

 

Protein sequence

MPTVNQLVRK GRTSAAKKYK APALHYSFNS LRNKVAFGDG SPQKRGVCTQ VKTTTPKKPN 
SALRKIARVR LSNHMEVTAY IPGEGHNLQE HSVVLIRGGR VPDLPGVRYH IIRGTLDTAG 
VANRQQGRSR YGAKKGKAAP AKKK