| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0418 |
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| Symbol | |
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| ID | 5131062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 426211 |
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| End bp | 428205 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640529320 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001213881 |
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| Protein GI | 147669063 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCTT TCAAAATAGT CTCAGATTTT GCACTTACCG GTGACCAGCC CCAAGCAGTG
GAAAAACTGG CTGAGGGACT GGTAAGAGGG CTTACAGACC AGACCCTGCT GGGAGTGACC
GGCTCAGGCA AAACCTTTAC CATGGCTAAC GTTATAGCCA GAGTAAACCG CCCCACCCTG
ATAATCAGCC ACAACAAAAC TCTGGCCGCC CAGCTCTATT CAGAAATGAA AGAATTCCTG
CCCGAAAACT CGGTGGAATA CTTTGTCAGC TATTATGATT ATTACCAGCC TGAAGCTTAT
GTCCCCCAAA AGGACATGTA CATTGAGAAA GATTCAGATA TAAACGAGGA GATTGATAAA
CTCCGTCATG CCGCTACCCG TGCCCTTTTT GAACGGCGGG ATGTGGTTAT CGTAGCCTCG
GTTTCCTGCA TATACGGTTT GGGCGAACCG GAAGAATACC GCAGTTTTGT ACTCCCTTTG
AAAAAGGGCC AATCTTTCCG GCGTGACCTT ATCCTGCGGC GTCTGGTAGA TATGCAGTAC
GAACGGAATG ACCTTGATTT CTCCCGCGGC AAATTCCGCC TGCGGGGAGA TACTCTGGAA
ATTCAACCGG CTTACGAAGA ACTGGCACTC AGGGTGGAAT TCTTCGGTGA TGAAATAGAA
CGGATAGTCA GCCTTGACCC GGTAAGCGGC GAACTTCTGG CTGATATAGA AGAGATAAAT
ATCTACCCCG CCAAGCATTT TGTGACCTCA GCCGAAAAAA TGGCTGAGGC CATAAAGAGC
ATTCAAGCCG AGCTTGAAGA CCGTCTGAAG GAACTGGAAG CCGAAGGCAA GATGCTGGAA
GCCGCCCGCC TGAAGCAACG AACCAATTAT GATTTGGAGA TGATGGAACA GGCAGGATAT
TGCTCAGGGG TGGAAAACTA TTCCCGCCAT CTGGCAGGGC GGAAAGCAGG CAGTGCCCCT
TGGACACTGC TGGATTATTT CCCGGAAGAT TTTCTGCTGA TAGTTGACGA GTCCCATATG
AGCCTCCCCC AGATACGGGG TATGTACGCC GGAGACTCCG CCCGTAAAAA AACTCTGGTG
GACTACGGCT TCCGCCTGCC GTCAGCTATG GATAACCGCC CCTTGAGCTT TGATGAATTT
AAAGCCAGAG TCAAACAGGC TATTTATGTA TCAGCCACAC CCGGCCCGTA TGAAAAAGAA
CACTCCCTGC AGGTAGTGGA GCAGCTGGTA CGCCCCACCG GTCTGCTTGA ACCGGTCATG
ACGGTAAAAC CCACCGTCGG GCAGATAGAT GACCTGCTGG AAGAAGTAAA AAAACGGGTA
GCGAAAAATG AACGGGTGCT TATCACTACC CTTACCAAAA AGATGTCTGA AAAGCTGGCT
GATTATCTGG TAGAAATGGG AGTAAAAACC CATTACCTGC ACTCCGAGGT AGATACTCTG
GAACGGATAG AAATACTCCG TGACCTGCGT CTGGGGGTTT ATGACGTAAT AGTGGGCATA
AATCTGCTCC GCGAAGGATT AGACCTGCCT GAAGTCAGTC TGGTGGCCAT ACTGGATGCC
GACAAAGAGG GATACCTTCG GTCTGAACAG GCACTTATCC AGACTATGGG ACGGGCTGCC
CGCCATGTGG ACGGGCAAGT AATAATGTAC GCAGATAAAA TAACCGGGTC TATGCAGCGT
GCCATGGATG AAATTATCCG CCGCCGTAAA ATACAGGAAG ATTATAACCG CCTGCACAAT
ATTACCCCGC AGGGTATCCG CAAGGCTATC AAGGATATAA ATGAACGTAT CCGCTCGGTC
ACAGCCGAAG TCAGCGGCCC GGAGTTCAGA CCCACCCCCA CCCTCAGGGA AGATATTGCC
CGTTTGATAA AAGAACTGGA AAGCCAGATG AAAAAAGCGG CTAAAAATCT GGAGTTTGAA
CGGGCAGCCC TTATCCGTGA CCGGGTGGTG GAACTGCGTG CCGCACTTGA AATAGACCCG
CTGGGCAGAA AATGA
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| Protein sequence | MPSFKIVSDF ALTGDQPQAV EKLAEGLVRG LTDQTLLGVT GSGKTFTMAN VIARVNRPTL
IISHNKTLAA QLYSEMKEFL PENSVEYFVS YYDYYQPEAY VPQKDMYIEK DSDINEEIDK
LRHAATRALF ERRDVVIVAS VSCIYGLGEP EEYRSFVLPL KKGQSFRRDL ILRRLVDMQY
ERNDLDFSRG KFRLRGDTLE IQPAYEELAL RVEFFGDEIE RIVSLDPVSG ELLADIEEIN
IYPAKHFVTS AEKMAEAIKS IQAELEDRLK ELEAEGKMLE AARLKQRTNY DLEMMEQAGY
CSGVENYSRH LAGRKAGSAP WTLLDYFPED FLLIVDESHM SLPQIRGMYA GDSARKKTLV
DYGFRLPSAM DNRPLSFDEF KARVKQAIYV SATPGPYEKE HSLQVVEQLV RPTGLLEPVM
TVKPTVGQID DLLEEVKKRV AKNERVLITT LTKKMSEKLA DYLVEMGVKT HYLHSEVDTL
ERIEILRDLR LGVYDVIVGI NLLREGLDLP EVSLVAILDA DKEGYLRSEQ ALIQTMGRAA
RHVDGQVIMY ADKITGSMQR AMDEIIRRRK IQEDYNRLHN ITPQGIRKAI KDINERIRSV
TAEVSGPEFR PTPTLREDIA RLIKELESQM KKAAKNLEFE RAALIRDRVV ELRAALEIDP
LGRK
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