| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0411 |
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| Symbol | secA |
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| ID | 5131113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 416041 |
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| End bp | 418899 |
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| Gene Length | 2859 bp |
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| Protein Length | 952 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640529313 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001213874 |
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| Protein GI | 147669056 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0851179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAT TCTTTTCCAG CTTCGGAGAC TCAAACGAAA AAGAGATCCG GGCACTTGAA
CCGCTGGTAG ACAAAATAAA CCAGCTTGAA AACTCATTCA CCACCCTGAG TGACGAAGCC
CTAAAGGCTA AAACCATTGA ATTCAGGGCA CGCCTGAAAG ATACTTTTGA AACTACTACG
GCAGGTATTC AGGAAGATAT AACCAGTACC ACTGCTGAAC TAGCCGAAGC CCAGAAGATA
GCCGACAACA GCAAACAAAG CCGCCTTAAA GCCAAACTAG AGTCTTTAAA TAAAGACCTT
TCCGCTAAAG AGACTACCGC TCTGAACGGA ATACTCCCTG AAGCCTTTGC CGCTGTCAGA
GAAGCTTCCC GCCGGACTAT CGGCCTAAGG CACTATGATG TTCAGCTTAT CGGCGGTATG
GTACTCCACC ACGGCAAGAT AGCCGAAATG CGTACCGGTG AAGGTAAAAC ACTGGTTGCT
ACCCTGCCCC TCTATCTTAA TTCCCTGCTG GGAAAAGGCG TGCATCTGGT AACTGTGAAT
GATTATCTGG CCAGACGTGA TGCCTACTGG ATGGGACCTG TTTACCACGC ACTGGGGGTT
AGCGTTTCCA GTATTTATCC CATGCAAACC CCTACTGAAG AATTACCTTC ACGCCTGTTT
GACCCTGACT ATACCTCGGA AATACCCGGT GACCCGTGGA CGCACTTCCG CCCCATCTCA
CGGCAAGAGG CCTATAAAGC GGATATTACT TATGGAACTT CTACCGAATT CGGTTTTGAT
TACCTGCGTG ACAACCTGCG GCCGGACCTT GCCCAGTGTG TTCAGCGGGA TATGAACTAT
GCCATAGTAG ATGAAATTGA CAACCTGCTT ATAGACGAAG CCCGTACACC TCTTATCATC
TCCGCCCCGG ATACCGAGGC AGGCAAACTG TACGATGTAT TTGCCCGCCT GTCTCCCCGT
TTGGTAGCCG TAAAAGACTA TGAGATAAAT GAGAAAGACC GCAATGCTGA ACTGACCGAA
GATGGTTGGG CAAATGTGGA GAAACTGCTT TCACGCGAAG GCGTCATGAA GGGCAACAGC
CTGTATGACC CCCAGAATGC CCCGCTTATC CGCCACCTGC GAAATGCCCT TTCCGCCAAG
GAGTTTTATA AGAAAGACCA CCAGTATGTA GTCAAAGAAG GTGAAATTAT CATTATTGAT
GAGTTCACCG GCCGCATGAT GCTGGGACGG CGTTACTCCG AGGGCTTGCA TCAGGCTATT
GAAGCCAAAG AGCATGTAAA GGTACAGCAG GAAAGCAAGA CCTATGCCAC GGTAACCATT
CAAAATCTGT TCCGCATGTA TCGCAAACTT TGCGGCATGA CAGGCACCGC CGCTACTGAA
GCGGAGGAAT TTTCCAAGAT TTATAAACTG GAAGTGGTTA TTATCCCCAC TAACAAACCC
GCCGTTCGTG AAGACTACGG CGACCAGATA TATAAAGACC AATCCGCCAA ATTCAAAGCC
GTGGTCAATG AAATTGACGA AATGCGTAAA CTGGGACGCC CGGTACTGGT TGGCACAGTT
TCCATTGAAA ACTCTGAAAT GCTTTCAAAC ATGCTGAAAA GGCAAGGGAT TGAACACAAG
GTACTGAATG CCAAACAGCA TGAAAAGGAA GCTCAGGTAG TAGCCGAAGC CGGCAAACCC
GGTGCGGTAA CTGTAGCTAC CAACATGGCC GGACGCGGTG TAGATATACT GCTGGGTGGC
AAAGAACCAA CTAAAGATGA CGCCAAAGTC TATAACGAGT GGCAAGCACA CCACCAGCAG
GTGCTGGAAG CCGGCGGTTT ACACGTAATA GGTACAGAAC GCCACGAATC CAGACGGATT
GACAACCAGC TTAGGGGACG CTCAGGCCGA CAGGGAGACC CCGGTTCTTC CCGGTTCTAT
GTAGCGCTGG ATGATGATAT TATGCGCCGG TTCGGCAGTG AACGCATACA GGGCATAATG
GAATGGGCCG GCATGGACGA AAACACCCCC ATAGAAAACG GTCTGGTCAG CCGCACTCTG
GAAAATGCCC AAAAACGGGT GGAAGGGTAC CATTTTGACG TACGCAAACA CCTGGTGGAA
TATGATGACG TAGTAAACAA GCACCGCGAA GTCATCTATG CAGAACGCCG CAAGATACTC
TCCGGGGCAG ACCTGAAATC CAACATACTG GATATGATTC GGGAAGAAAT AATAACCCAG
ACTGCCGAAC ATACCCGGGG ATACGACTCT TCAGAATGGA ATCTGGATGG GCTTGTCACC
CACCTTAACG GCATTTTTAC CCTGCCCGCC GAGATAAATG CAGAAGCGCT GGCTAAACTT
TCTCAGGAAG AAATAACCGA CCTGCTCACC CGCACTGCCG AAGAGCTTTA CCAGAAAAAA
GAAGATGAAA CCGGAGCGGG CTCTATGAGA CTGCTTGAAC GGATTATCAT GCTTCACACT
CTGGATTCAC TCTGGGTGGA ACACCTGACC ATTATGGAAA ACCTGAGAAG GGAAATCGGC
TTGCAGGCTT TTGCCCAGCG TGACCCCCTT ATCGCCTATA AGAACGAAGG CCATGTACGT
TTTCAGGAAT TGCTGGAAAC TATCAAACAT GACGTAGTTC ACAATATTTA CCGGATTGGT
ATACAGATTC AGCATCAAAC CGAATCGGCT ACTGCCAAAG CTGCTTCCAG CCCGGTACAG
CAGCAAAAAC CCCTGCCCGC CGCACCCGCT GCGGCCATAC CCGGCGTCTC TGCCAAAGCG
GCTACTCAAT CCACCACTCC CGCTGCCAAG GAAATAGGTA GAAATGACCC CTGCCCCTGC
GGCAGCGGGA AAAAATACAA GAAATGCTGC GGCAAATAG
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| Protein sequence | MFKFFSSFGD SNEKEIRALE PLVDKINQLE NSFTTLSDEA LKAKTIEFRA RLKDTFETTT
AGIQEDITST TAELAEAQKI ADNSKQSRLK AKLESLNKDL SAKETTALNG ILPEAFAAVR
EASRRTIGLR HYDVQLIGGM VLHHGKIAEM RTGEGKTLVA TLPLYLNSLL GKGVHLVTVN
DYLARRDAYW MGPVYHALGV SVSSIYPMQT PTEELPSRLF DPDYTSEIPG DPWTHFRPIS
RQEAYKADIT YGTSTEFGFD YLRDNLRPDL AQCVQRDMNY AIVDEIDNLL IDEARTPLII
SAPDTEAGKL YDVFARLSPR LVAVKDYEIN EKDRNAELTE DGWANVEKLL SREGVMKGNS
LYDPQNAPLI RHLRNALSAK EFYKKDHQYV VKEGEIIIID EFTGRMMLGR RYSEGLHQAI
EAKEHVKVQQ ESKTYATVTI QNLFRMYRKL CGMTGTAATE AEEFSKIYKL EVVIIPTNKP
AVREDYGDQI YKDQSAKFKA VVNEIDEMRK LGRPVLVGTV SIENSEMLSN MLKRQGIEHK
VLNAKQHEKE AQVVAEAGKP GAVTVATNMA GRGVDILLGG KEPTKDDAKV YNEWQAHHQQ
VLEAGGLHVI GTERHESRRI DNQLRGRSGR QGDPGSSRFY VALDDDIMRR FGSERIQGIM
EWAGMDENTP IENGLVSRTL ENAQKRVEGY HFDVRKHLVE YDDVVNKHRE VIYAERRKIL
SGADLKSNIL DMIREEIITQ TAEHTRGYDS SEWNLDGLVT HLNGIFTLPA EINAEALAKL
SQEEITDLLT RTAEELYQKK EDETGAGSMR LLERIIMLHT LDSLWVEHLT IMENLRREIG
LQAFAQRDPL IAYKNEGHVR FQELLETIKH DVVHNIYRIG IQIQHQTESA TAKAASSPVQ
QQKPLPAAPA AAIPGVSAKA ATQSTTPAAK EIGRNDPCPC GSGKKYKKCC GK
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