| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0404 |
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| Symbol | |
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| ID | 5131178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 407134 |
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| End bp | 408672 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640529306 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_001213867 |
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| Protein GI | 147669049 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0534144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATAA TCTCAAGCGT CCAAATGCGC CAGATAGAAG ATGCCTGCCT GAAACAGGGC
ATTAGCACCG AAACCCTGAT GGAAAATGCC GGCAGGGCGG TGGCTGTGTT TGCCCGCCAT
CTGCTGGAAG AGCAAAATGG CTGTCGGGTG CTGATACTGG CGGGTGCGGG CAATAACGGG
GGTGACGGGC TGGTTGCCGG ACGTTATCTG CGGAGCTGGG GTGAAAAGGT AAGCATATTT
GTGCCTTTTA TAGATACCCC AAAAGGCAAA ACCGTTCAAG GCTGTTTGGA AGCCTCAGGT
GATATATTTG CAGGTTTAGC GGAACTTGAA GAGCATCTGG CGGATGCAGA TTTGGTAATA
GATGCTTTGC TGGGTACAGG CGTAAACCGC CCGCTTGAAG GCATTTATAA AGAAGCTCTG
CAAATGACAG CAAACGTTAG AAATACCAGA CCAGAGATGC AAGTGCTGGC CGTAGATTTA
CCCTCCGGTT TAAATGCTGA TACCGGGCAG GCGGATGATG CTTGCCTAAA GGCGGACTTT
ACACTTTCGC TGGGCATTGC CAAGCAAGGG CTTTTTACCC ACCGCGGGCT GGAATTAAGC
GGGGCGGTTT CGGTGGCGGA TATCGGCATA CCGCCTGAAC TGACAACCGA TATCCAAGCC
GTTTTGATTG AAAAAGACTG GGCAAAGAGT GTTTTGCCTG TTCGTTCCCC CCATGCCAAC
AAGGGCAATT TTGGGCGGGT GATGATTGTA GCCGGGAGTG ACCGTTATAT AGGGGCGGCC
ATATTAGCAG GGAGTGCCGC TATGCGTGTT GGTGCGGGCT TGGTTACACT GGCTTTGCCG
GAAAGTTTGA CCGGAGCGGT AGCGAGCAGA ATACCTGAAG CTACTTATCT GCCTTTGCCT
GAAGTATCCT CCGGTACTGC GGATAACTCT GCTGCACGCT TTGTCCTGAG TGAACTGGGT
AAATATGATG TACTCCTTAT AGGGCCAGGT CTGGGTCAAA CCGGGTATTC CGCCAGACTG
GTTACCGAAG TGCTCTCAAA CCTGCCCGTA GGGCTTAAGG TTATAATAGA CGCAGATGCA
TTAAATATAC TTTCAGCTAT CACGGATTGG TGGCTGGAAT ATAAATTTGA TGCGGTACTC
ACCCCGCATC CGGGTGAAAT GGCCCGTCTG GCAAAAACTA CCACCGAGGC TGTTCAGTCT
GACCGTTTCG GGCTTTGCCA AAAGTTTGCC TGCAAATGGG GCAAGACGCT TATCCTGAAA
GGTGCCGGGA CAATAGTGAC ATCACCGCAG GGGGAAACCC TGTGCAATCC GGCGGCTAAC
CCTGTGCTGG CTTCAGCCGG TACGGGTGAC GTACTTGCCG GAATAATAGG CGGTCTTTTG
GGGCAGGGCG TAAGCCTTTT TGAGGCGGCA GGACTGGGAG TTTACCTGCA CTCTCTGGCC
GCAGAAGCAT TGCGGAGTGA GATAGGTGAT GCCGGTGTAC TGGCTTCGGA TTTGCTGTTA
AAATTGCCTG TGATTATAAA AGGATTGAAA CAGGGCTAA
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| Protein sequence | MEIISSVQMR QIEDACLKQG ISTETLMENA GRAVAVFARH LLEEQNGCRV LILAGAGNNG
GDGLVAGRYL RSWGEKVSIF VPFIDTPKGK TVQGCLEASG DIFAGLAELE EHLADADLVI
DALLGTGVNR PLEGIYKEAL QMTANVRNTR PEMQVLAVDL PSGLNADTGQ ADDACLKADF
TLSLGIAKQG LFTHRGLELS GAVSVADIGI PPELTTDIQA VLIEKDWAKS VLPVRSPHAN
KGNFGRVMIV AGSDRYIGAA ILAGSAAMRV GAGLVTLALP ESLTGAVASR IPEATYLPLP
EVSSGTADNS AARFVLSELG KYDVLLIGPG LGQTGYSARL VTEVLSNLPV GLKVIIDADA
LNILSAITDW WLEYKFDAVL TPHPGEMARL AKTTTEAVQS DRFGLCQKFA CKWGKTLILK
GAGTIVTSPQ GETLCNPAAN PVLASAGTGD VLAGIIGGLL GQGVSLFEAA GLGVYLHSLA
AEALRSEIGD AGVLASDLLL KLPVIIKGLK QG
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