| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0397 |
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| Symbol | |
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| ID | 5131031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 400706 |
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| End bp | 401527 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640529298 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001213860 |
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| Protein GI | 147669042 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000137716 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAA ACAAGATTAA GCCGCCTGAA AAAATAGCCC TCATACCAGG GGCTGAACCA
TCTAACCGGA TGGATCCATG GTGGTGGTTG GTAGCCGGGG TTTTTGCTCT GGCGGGCGGT
CTGATGCTGT TTCAGCCTGA CCCTTTTCTG GATATTTTCA AGTACGTATG GGTAGGTATC
GGGATTACGG TGCTGGTTGC CGTTGTATCT TATTTCCTGA TGCTTATTTT GGGGTTATTC
GGCGGTCTGG GGCGTTTATC TCAGAATACT TTAATCCGCG GCATAGCCAC ATTTTATGTT
GAAATTGTAC GCGGAATTCC CTTGCTGGTT CAGCTTATCT GGTGGTATTT TGCCTTCCCG
GTAATAATCC AGACCATAGG GCAAGCCCTG AATTTCGGAC CGATGCTGAA CTATCAGGCC
AACCCCATTG TGATGGCTAT CTGGGGTATG ACCTTCTGCT ACGGCGCCTA TATGAGCGAA
ATTTACCGGG CAGGCATCCA GAGTATTCCC AAAGGGCAAA TGGAAGCGGC CCGCAGCCTT
GGCATGAGTC ATACTCAGGC AATGCGGTTT ATAATACTGC CGCAGGCACT CAGGGTGATC
TTGCCCCCCA TGGGTAACGA ATTTATCTCA CTCCTAAAGG ACACTTCACT GGTATCTACC
GTAGCCGTAG CTGATATGGT AAGGCTGGGG CGTGAATTTA CCGCTACCAA TTTCAACCCC
ATTGAGGTTT GGAGTATGAT TGCCCTGCTC TACCTGATAC TTACGCTCCT GTCCAGCCGT
CTGATAAACT ACATAGAAAA GAAAACTGCG TTTTCAAGAT AA
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| Protein sequence | MAENKIKPPE KIALIPGAEP SNRMDPWWWL VAGVFALAGG LMLFQPDPFL DIFKYVWVGI
GITVLVAVVS YFLMLILGLF GGLGRLSQNT LIRGIATFYV EIVRGIPLLV QLIWWYFAFP
VIIQTIGQAL NFGPMLNYQA NPIVMAIWGM TFCYGAYMSE IYRAGIQSIP KGQMEAARSL
GMSHTQAMRF IILPQALRVI LPPMGNEFIS LLKDTSLVST VAVADMVRLG REFTATNFNP
IEVWSMIALL YLILTLLSSR LINYIEKKTA FSR
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