| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0359 |
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| Symbol | rpsB |
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| ID | 5132121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 366021 |
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| End bp | 366758 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640529259 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_001213822 |
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| Protein GI | 147669004 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000354346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCCAACTA CAAACATTAA AGAGCTTCTG GAAGCCGGGG CACATTTTGG TCACCAGACC
AGCCGCTGGC ATCCGCGGAT GAAGAAATAT ATCTTCACCA AACGCAACGG TATTCACATT
ATTGACCTTG AAAAGACCGT AGTCATGCTG GACAAAGCCT GCAATTACAT TAACCAGGTT
GTCAGTGATG GCGGTAAGGT TCTTTTTGTT GGTACCAAAA AACAGGCCCA GGAAATTTTG
GCTGAAGAAG CCAAGAGATG CGGCATGTAT TTTATCAATC AGCGCTGGAC AGGTGGTATT
TTAACCAATT TCCACTCCAT TCAGTCACGG ATTGATTATC TGGTACGGCT GGAAGACCAG
CAGGCCAGGG GTGATTTTAG CCGTTTGCCC AAAAAAGAAG CTCAGAAACT GGGTGAGGAA
ATTGCCCGTC TGAACCGCAC TATGGGCGGC TTCAAGGAAA TGACCCGCCT GCCGGATGTC
ATCTTTGTAG TAGACCCTAT CAAGGAAAAG ATTGCCATGG CTGAAGCCAA ACGCATGGGT
GTTCCTCTGG TAGCTATGGT TGATACCAAC TGCAACCCTG ACGAAGTTGA CTATCCCGTT
CCTTCTAACG ATGATGCTAT GCGGGCTATC AAACTGATTT GCTCCAAAAT GGCTGATGCC
GTGATAGAAG CCCAGAATGC CATGAAGGTT ACCGAAGTTG AAACCACCGG TGAAGCTCAG
GCCGAAACTG CCGGTTAA
|
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| Protein sequence | MPTTNIKELL EAGAHFGHQT SRWHPRMKKY IFTKRNGIHI IDLEKTVVML DKACNYINQV
VSDGGKVLFV GTKKQAQEIL AEEAKRCGMY FINQRWTGGI LTNFHSIQSR IDYLVRLEDQ
QARGDFSRLP KKEAQKLGEE IARLNRTMGG FKEMTRLPDV IFVVDPIKEK IAMAEAKRMG
VPLVAMVDTN CNPDEVDYPV PSNDDAMRAI KLICSKMADA VIEAQNAMKV TEVETTGEAQ
AETAG
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