Gene DehaBAV1_0353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0353 
Symbol 
ID5131578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand- 
Start bp361494 
End bp362627 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content49% 
IMG OID640529253 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_001213816 
Protein GI147668998 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCATT CAATAAAGAA AGTTGTCATA CTGGGGTCTA CCGGTTCTAT CGGCCGACAG 
ACTCTTGAAG TTATCCGTTC ACTGCCAGAC CACTTCAAGG TACTGGGGCT GGCTGGCGGA 
GCAAATGTAA ATCTGCTAAA AGAACAGGCT GGTGAATTCC GTCCTGAATA TATATACTGC 
CGTGACTGCC ATAAGGAAAG TGCCTGCAAT TCCCGCTTCA TTCCTATGGA GGAAATGGCC 
GCCCTGCCCG AAGCAGACGT AATAGTAGTG GCCACTCCCG GCGGTGCCGG TTTACAGCCG 
GTACTTGCGG CTGCTAAAGC CAGTAAGGTA ATAGCTCTGG CCAACAAGGA GTCTCTGGTT 
TCCGCCGGTG AAATAGTAAC CGGTATTGTA CGGGAAAATA AAGCTAAACT ACTACCAGTA 
GACAGTGAAC ACAGTGCCAT CTGGCAATGT TTGTCAGGTG AGGTTACACC CCCTTCCAGA 
ATTATACTGA CCGCCTCCGG CGGACCTTTC CGTTCTTTGA CTAAAAACGA AATAGATAAA 
GTCACCCCCG AACAAGCACT GAAGCACCCC TCATGGAAAA TGGGGCTTAA AGTTACCATA 
GACTCGGCCA GTTTGATGAA CAAAGGTCTG GAAATAATAG AAGCCCGCTG GCTGTTTGAT 
ATGCACATAC AGAATATTCA GGTGGTTATC CACCCCCAGA GCATTATCCA CTCCATGGTG 
GAGTTTGCAG ACGGCAGTTT AAAGGCCCAG CTTTCGCGCC CGGATATGCG TTTCCCGATT 
CAGTATGCCC TGACTTACCC CGAAAGAGTG GCCAACCATA CCCTGCCCCG CCTTAACTGG 
GCGGAAGTGG GCAAACTGGA TTTTGAAATA CCGGACATGA CCAGATTCCC CTGTCTGGGT 
CTGGCGATAT CAGCCGGAGA AGAAGGAAAA ACATTTCCGG CAGCATTATG TGCCGCAGAC 
GAAGTGGCTG TAGATCTGTT CCTTAAGGGT AAAATAAGCT TCGGGCAGAT ACCCGAACTG 
ATAGCCAAAG TATTGGATGC CCATCAGCCG GTTTCCAAGC CGGATATTGA TGATATTTTG 
GCCGCAGATG CTTGGGCGCG CCAAAAAGTA ACCGAACTGG CAGGTAATTT ATAA
 
Protein sequence
MVHSIKKVVI LGSTGSIGRQ TLEVIRSLPD HFKVLGLAGG ANVNLLKEQA GEFRPEYIYC 
RDCHKESACN SRFIPMEEMA ALPEADVIVV ATPGGAGLQP VLAAAKASKV IALANKESLV 
SAGEIVTGIV RENKAKLLPV DSEHSAIWQC LSGEVTPPSR IILTASGGPF RSLTKNEIDK 
VTPEQALKHP SWKMGLKVTI DSASLMNKGL EIIEARWLFD MHIQNIQVVI HPQSIIHSMV 
EFADGSLKAQ LSRPDMRFPI QYALTYPERV ANHTLPRLNW AEVGKLDFEI PDMTRFPCLG 
LAISAGEEGK TFPAALCAAD EVAVDLFLKG KISFGQIPEL IAKVLDAHQP VSKPDIDDIL 
AADAWARQKV TELAGNL