| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0350 |
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| Symbol | |
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| ID | 5131469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 357571 |
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| End bp | 359280 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640529250 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001213813 |
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| Protein GI | 147668995 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.918323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTATT CCAGGTTATT TGGCAAAACC CAGCGTGAAA TCCCGTCAGA TGCCGAAACA
ATAAGCCACC AGTTGCTTCT GCGTTCGGGC ATGATAGCCC AGCTGACCGC CGGAGTATAT
TCATTTATGC CTCTGGCCTG GCGTTCTATC CAGAAAATTG AAACCATTAT ACGGCAGGAA
ATGAATAAAG CAGGCTGTCA GGAACTGGCC ATGCCGGTAC TTCAGCCGGT GGAAATATGG
CAGCAGAGCG GACGTGAAGC CCCCTTCGGG CAGACCCTTT TCCATTTGAA AGACCGCAAA
GACCGTAATC TGGTGCTTGG ACCTACCCAT GAAGAGGTAA TAACTGACCT CGCCAGCCGC
TATATCCAGA GTTACCGTGA CCTGCCTCAG CGGCTTTACC AGATACAGGC CAAGTTCCGT
GACGAACCCC GCCCCCGCGG CGGATTGATA CGGGTACGTG AATTTATTAT GAAAGATATG
TACAGCTTTG ACGCCAGCCC CGAAGGGTTG GATGACAGCT ATCAGACCAT GAAACAGGCC
TACGAAAGTG TTTACCGCCG TTGCGGTCTG GAATCTATGG TGATAGACGC GGACAGCGGA
GCTATAGGCG GCAAGGCCTC ACATGAGTTT ATGATTGTAG CCGAAAGCGG TGAAGACAGT
ATCATCTACT GCCCGAAATG CAGCTACGCC GCCAATGCCG AAAAAGCTGT ATTCAAAAAG
AAAACCCTGT CCAAAGAAAC CCTGAAAGAT TTGGAAGAAG TAGCCACTCC CGGACAGAAA
GCTATTTCAG ACGTAGCCCG TTTTCTTGCG GTCAAACCTG AAAACACCCT CAAAGCGGTC
TTCTATATGG CAGACGGCAA GTTTGTAATG GCTGTTATTC GGGGAGATTT GGATATAAAC
GAGGTAAAGC TTAAAAACCT GCTGAAGTGC AATGACCTGC GTCTGGCGGA AGACGGTGAA
GTCAAGGCCG CCGGAGTAGT GGCAGGTTCG GCATCACCGG TAGGCTTAAA AAATATCCTG
ATAGTTGCAG ATGACTCTGT TGAAAACGGC TCTAACTTCG TAGCCGGTGC CAATAAAGAC
GGCTTTCACC TGAAAAACGT CAACTGCGGG CGGGATTTCA GGGCGGATAA AATGGCGGAT
ATTGCTCTGG CTGCCGAAGG CTCGGCCTGC CCCTTCTGTG ACGGTACTTT CGCCTCCAAA
CGGGGGGTGG AAGTGGGGCA TATTTTCAAA CTGGGGACAT TCCTTTCCGA ACGTTTCGGG
GCAAACTTCA CTGACGCAGA GGGTGTCAGC CACCCCATTA TTATGGGTTG CTACGGTATG
GGGGTAGGAC GGCTGCTGGC CGCCGCCATA GAGCAAAACC ATGACGAAAA AGGTATTATT
TGGCCTATGC CAATTGCCCC GTATCAGGTG TATATCTGCG GGCTTTTTCT GGATAACCCC
GTTGTCCGCG AAAGCGCTGA AAAAATATAT AAAGAACTGG AAGCCAAAAG CATTGAAGTG
CTGTTTGATG ACCGTGAGCT TACAGCCGGG GTTAAATTTA ACGATGCAGA CCTGCTGGGC
ATACCCCTCA GGCTGACTAT CAGCCCCCGC AATCTGGATA AGGGCGGGGT GGAATTTAAA
CTCCGCCGAA ACAAGGAATC CGAGCTTGTT CCGCTGGATA GTATAGTGGA AAGGGTAATA
GCCACCATCA AATCAGAGAG TGATTTATAA
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| Protein sequence | MRYSRLFGKT QREIPSDAET ISHQLLLRSG MIAQLTAGVY SFMPLAWRSI QKIETIIRQE
MNKAGCQELA MPVLQPVEIW QQSGREAPFG QTLFHLKDRK DRNLVLGPTH EEVITDLASR
YIQSYRDLPQ RLYQIQAKFR DEPRPRGGLI RVREFIMKDM YSFDASPEGL DDSYQTMKQA
YESVYRRCGL ESMVIDADSG AIGGKASHEF MIVAESGEDS IIYCPKCSYA ANAEKAVFKK
KTLSKETLKD LEEVATPGQK AISDVARFLA VKPENTLKAV FYMADGKFVM AVIRGDLDIN
EVKLKNLLKC NDLRLAEDGE VKAAGVVAGS ASPVGLKNIL IVADDSVENG SNFVAGANKD
GFHLKNVNCG RDFRADKMAD IALAAEGSAC PFCDGTFASK RGVEVGHIFK LGTFLSERFG
ANFTDAEGVS HPIIMGCYGM GVGRLLAAAI EQNHDEKGII WPMPIAPYQV YICGLFLDNP
VVRESAEKIY KELEAKSIEV LFDDRELTAG VKFNDADLLG IPLRLTISPR NLDKGGVEFK
LRRNKESELV PLDSIVERVI ATIKSESDL
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