Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0348 |
Symbol | pheT |
ID | 5132226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 354352 |
End bp | 356781 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640529248 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_001213811 |
Protein GI | 147668993 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0227209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAC CTTTGAAGTG GCTTAAAGAA TACCTTCCAA CTGATATACA GCCTGCCGAA CTGGCCGAAC GGATGACTAT GGCCGGTACT GAGGTGACAG TATTAAATTC CCATAAAGAC AAATGGCCAA ACGTATATGT AGGCCAGATT ATGGAAGTAA ACCGCCACCC CAACGCTGAC CGCCTGGTGC TGGTAAAGGT GGATTGGGGG CAGGGGCAGG AAACAGTGGT TACCGGCGCA CCTAACTGCA AAGTCGGTGA CAAGGTGGTT TTTGCCCGTA CGGGTGCAGT CTTGATAGAC GGTCACAACG GTAAGGAAAT TGTGCTGAAG CCGGCTGTTT TGCGGGGAGT GGAATCCTGC GGAATGGTTT GTTCCGAACG GGAACTGGGG TTGTCAGATG AACATGAGGG TATTTTGGTA TTGCCGGCGG ATGCGCTTGT TGGCATGCTG GCCAGCGAAT ATCTGGGTGA GGTAATACTT GATCTGGAGC TTACCCCTAA CCGGGGTGAT TTGATGTGTG TAACCGGCGT AGCCAGAGAA CTGGGTGCAC TGATAGACCG TTTGCCTGCT ATCAGCGACC CGGATTTCAA AGCAACCGGT CCGGATATAA AAGAAAAAAT AGAAATTGAA ATAAATAACA GCAAACTCTG TACCCGTTAT ACCGCCAGCC TGATAGAAGG AATCAAACTT GGGGAATCGC CAGACTGGCT TAAAGAACGG CTGATTGCCT GCGGTATGCG CCCTATAAAT AACGTAGTAG ATGCCACCAA CTACGTCATG CTGGAATTTG GCCAGCCACT GCATGCCTTT GACTACGACC AGATAAAATC ACGGCATATT ATTGTCCGCC CCGCGGCAGA GGGTGAAGTT TTAACTACTC TGGATGGGGT TGAACGGAAA CTTAGCCCGG ATATGCTGCT TATTACCGAA CCTGACAGGA TAATTGCCTT GGCGGGGGTG ATGGGTGGTG AAAATACCGA GGTAACTGAA AAAACCTCCC GCATACTTTT GGAATCGGCC ACCTTTGATA AGCAAAGCAT CCGTAAGACG GCCAGAGGTT TAAAACTCCA GAGTGAGGCT TCTGCCCGTT TTGAAAAGGG GCTTAGCTAC GAACTCGCTC CTATTGCTCT GAAACGCGCC ACCCAGCTGA TACTTGAAAT AGCCGGTGGA CAGGCAGCTT CAGGGTTGAT AGATGTTTTG CCTAATAAAA AGGAAAGAAA CGGTATTGTG CTCTCACTGG CAAAGGTTAA TCAGATATTA GGCTATGAGA AAGAACCGCC TGATGCCTGT AAAATAGCCA AAAGGCTGGG TTTTATCTGG CTTCCCGAAT ATGTACCCGG CATGGAAGAA TTCGGTTACG GTGCGACTGA GGATATGGTG CGTATTTATC CGGGATATTG GCGGATGGAT ATTGAAACCG ATATTGATAT GATTGAAGAA GTGGCCAGAA TAGCGGGCTA CCATACCATA CCCTGCCTGC CTCTGGATAA AGCTATACCC AAAATAGAAA CGCCCCCGTT GCCCGGCATG AAGCGTTTCC TAAGGCAAAT ACTCTCAGGT TATGGTTTTC AGGAACTTAT TTCATATTCA TTTACCAGCC GTGAAATGCT TTCCCGTGTT TCATCAGGTG CTGAGCCCGA ATTTCTGGCT ATCAGCAACC CCATGAGCAG TGAGCAAGAG GTTATGCGCA CCAGTTTGCG TCCCAGCTTG TATGCTTCTC TGGCGGCAAA CCGCCGCTTT GAAAAAGACG GTCTCAGGCT TTATGAGCTT GGGCGTGTTT ACCTGCCGAA AGAGAATAAA AAACAGGAAG AACCTGAGAT GCTGTGTGCT GTTATAGCGG GTGGTTCGTC TCAATCCCGG TGGCAGAGAA ATACCGCCGG TTTTGACTTT TTTGATGTTA AGGGCATTGT GGAATCTATG GTAAGCCGTT TGGGGCTTTC AGCTGATTTT GTGGTATCTC ATGAACATGG CTTGTCCCAT GGGTATCAGG CCGGTATTTT GGTAGGGGAT ATGCCGGTGG GTATTTTGGG GCAGGTAAGC CCTCAAATTG CAGATATATT TGACATAACA GAGCCGGTAT ATATGTTTGA AATCAATCTG TCAAAACTTA TTACCCGAGC TATGGTTCGC CGCAAATTTA ATCCTATTAA CCGTTTCCCG GCAGTTGAAC GGGATTTGGC TTTGGTGATT GACAGGCATA TCACTAATCG GCAGGTTATA GACATACTCT CAGAATACGA TTTGGTAAAA AATGCGGAAC TGTTTGATAT GTATCAGGGC AAACAGATAG CCGAGAATAA AAAATCACTG GCCTACCATC TTCTTTTCCA ATCTGATACC CATACCCTGA AAGATGCTGA AGTGGACGGA GTGATGAGCC AGATACTTGG ACGGCTGAAT ACTGAAACGG GAGCAGTTTT GCGTTCCTAA
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Protein sequence | MKIPLKWLKE YLPTDIQPAE LAERMTMAGT EVTVLNSHKD KWPNVYVGQI MEVNRHPNAD RLVLVKVDWG QGQETVVTGA PNCKVGDKVV FARTGAVLID GHNGKEIVLK PAVLRGVESC GMVCSERELG LSDEHEGILV LPADALVGML ASEYLGEVIL DLELTPNRGD LMCVTGVARE LGALIDRLPA ISDPDFKATG PDIKEKIEIE INNSKLCTRY TASLIEGIKL GESPDWLKER LIACGMRPIN NVVDATNYVM LEFGQPLHAF DYDQIKSRHI IVRPAAEGEV LTTLDGVERK LSPDMLLITE PDRIIALAGV MGGENTEVTE KTSRILLESA TFDKQSIRKT ARGLKLQSEA SARFEKGLSY ELAPIALKRA TQLILEIAGG QAASGLIDVL PNKKERNGIV LSLAKVNQIL GYEKEPPDAC KIAKRLGFIW LPEYVPGMEE FGYGATEDMV RIYPGYWRMD IETDIDMIEE VARIAGYHTI PCLPLDKAIP KIETPPLPGM KRFLRQILSG YGFQELISYS FTSREMLSRV SSGAEPEFLA ISNPMSSEQE VMRTSLRPSL YASLAANRRF EKDGLRLYEL GRVYLPKENK KQEEPEMLCA VIAGGSSQSR WQRNTAGFDF FDVKGIVESM VSRLGLSADF VVSHEHGLSH GYQAGILVGD MPVGILGQVS PQIADIFDIT EPVYMFEINL SKLITRAMVR RKFNPINRFP AVERDLALVI DRHITNRQVI DILSEYDLVK NAELFDMYQG KQIAENKKSL AYHLLFQSDT HTLKDAEVDG VMSQILGRLN TETGAVLRS
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