Gene DehaBAV1_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0348 
SymbolpheT 
ID5132226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand
Start bp354352 
End bp356781 
Gene Length2430 bp 
Protein Length809 aa 
Translation table11 
GC content47% 
IMG OID640529248 
Productphenylalanyl-tRNA synthetase subunit beta 
Protein accessionYP_001213811 
Protein GI147668993 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0227209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC CTTTGAAGTG GCTTAAAGAA TACCTTCCAA CTGATATACA GCCTGCCGAA 
CTGGCCGAAC GGATGACTAT GGCCGGTACT GAGGTGACAG TATTAAATTC CCATAAAGAC
AAATGGCCAA ACGTATATGT AGGCCAGATT ATGGAAGTAA ACCGCCACCC CAACGCTGAC
CGCCTGGTGC TGGTAAAGGT GGATTGGGGG CAGGGGCAGG AAACAGTGGT TACCGGCGCA
CCTAACTGCA AAGTCGGTGA CAAGGTGGTT TTTGCCCGTA CGGGTGCAGT CTTGATAGAC
GGTCACAACG GTAAGGAAAT TGTGCTGAAG CCGGCTGTTT TGCGGGGAGT GGAATCCTGC
GGAATGGTTT GTTCCGAACG GGAACTGGGG TTGTCAGATG AACATGAGGG TATTTTGGTA
TTGCCGGCGG ATGCGCTTGT TGGCATGCTG GCCAGCGAAT ATCTGGGTGA GGTAATACTT
GATCTGGAGC TTACCCCTAA CCGGGGTGAT TTGATGTGTG TAACCGGCGT AGCCAGAGAA
CTGGGTGCAC TGATAGACCG TTTGCCTGCT ATCAGCGACC CGGATTTCAA AGCAACCGGT
CCGGATATAA AAGAAAAAAT AGAAATTGAA ATAAATAACA GCAAACTCTG TACCCGTTAT
ACCGCCAGCC TGATAGAAGG AATCAAACTT GGGGAATCGC CAGACTGGCT TAAAGAACGG
CTGATTGCCT GCGGTATGCG CCCTATAAAT AACGTAGTAG ATGCCACCAA CTACGTCATG
CTGGAATTTG GCCAGCCACT GCATGCCTTT GACTACGACC AGATAAAATC ACGGCATATT
ATTGTCCGCC CCGCGGCAGA GGGTGAAGTT TTAACTACTC TGGATGGGGT TGAACGGAAA
CTTAGCCCGG ATATGCTGCT TATTACCGAA CCTGACAGGA TAATTGCCTT GGCGGGGGTG
ATGGGTGGTG AAAATACCGA GGTAACTGAA AAAACCTCCC GCATACTTTT GGAATCGGCC
ACCTTTGATA AGCAAAGCAT CCGTAAGACG GCCAGAGGTT TAAAACTCCA GAGTGAGGCT
TCTGCCCGTT TTGAAAAGGG GCTTAGCTAC GAACTCGCTC CTATTGCTCT GAAACGCGCC
ACCCAGCTGA TACTTGAAAT AGCCGGTGGA CAGGCAGCTT CAGGGTTGAT AGATGTTTTG
CCTAATAAAA AGGAAAGAAA CGGTATTGTG CTCTCACTGG CAAAGGTTAA TCAGATATTA
GGCTATGAGA AAGAACCGCC TGATGCCTGT AAAATAGCCA AAAGGCTGGG TTTTATCTGG
CTTCCCGAAT ATGTACCCGG CATGGAAGAA TTCGGTTACG GTGCGACTGA GGATATGGTG
CGTATTTATC CGGGATATTG GCGGATGGAT ATTGAAACCG ATATTGATAT GATTGAAGAA
GTGGCCAGAA TAGCGGGCTA CCATACCATA CCCTGCCTGC CTCTGGATAA AGCTATACCC
AAAATAGAAA CGCCCCCGTT GCCCGGCATG AAGCGTTTCC TAAGGCAAAT ACTCTCAGGT
TATGGTTTTC AGGAACTTAT TTCATATTCA TTTACCAGCC GTGAAATGCT TTCCCGTGTT
TCATCAGGTG CTGAGCCCGA ATTTCTGGCT ATCAGCAACC CCATGAGCAG TGAGCAAGAG
GTTATGCGCA CCAGTTTGCG TCCCAGCTTG TATGCTTCTC TGGCGGCAAA CCGCCGCTTT
GAAAAAGACG GTCTCAGGCT TTATGAGCTT GGGCGTGTTT ACCTGCCGAA AGAGAATAAA
AAACAGGAAG AACCTGAGAT GCTGTGTGCT GTTATAGCGG GTGGTTCGTC TCAATCCCGG
TGGCAGAGAA ATACCGCCGG TTTTGACTTT TTTGATGTTA AGGGCATTGT GGAATCTATG
GTAAGCCGTT TGGGGCTTTC AGCTGATTTT GTGGTATCTC ATGAACATGG CTTGTCCCAT
GGGTATCAGG CCGGTATTTT GGTAGGGGAT ATGCCGGTGG GTATTTTGGG GCAGGTAAGC
CCTCAAATTG CAGATATATT TGACATAACA GAGCCGGTAT ATATGTTTGA AATCAATCTG
TCAAAACTTA TTACCCGAGC TATGGTTCGC CGCAAATTTA ATCCTATTAA CCGTTTCCCG
GCAGTTGAAC GGGATTTGGC TTTGGTGATT GACAGGCATA TCACTAATCG GCAGGTTATA
GACATACTCT CAGAATACGA TTTGGTAAAA AATGCGGAAC TGTTTGATAT GTATCAGGGC
AAACAGATAG CCGAGAATAA AAAATCACTG GCCTACCATC TTCTTTTCCA ATCTGATACC
CATACCCTGA AAGATGCTGA AGTGGACGGA GTGATGAGCC AGATACTTGG ACGGCTGAAT
ACTGAAACGG GAGCAGTTTT GCGTTCCTAA
 
Protein sequence
MKIPLKWLKE YLPTDIQPAE LAERMTMAGT EVTVLNSHKD KWPNVYVGQI MEVNRHPNAD 
RLVLVKVDWG QGQETVVTGA PNCKVGDKVV FARTGAVLID GHNGKEIVLK PAVLRGVESC
GMVCSERELG LSDEHEGILV LPADALVGML ASEYLGEVIL DLELTPNRGD LMCVTGVARE
LGALIDRLPA ISDPDFKATG PDIKEKIEIE INNSKLCTRY TASLIEGIKL GESPDWLKER
LIACGMRPIN NVVDATNYVM LEFGQPLHAF DYDQIKSRHI IVRPAAEGEV LTTLDGVERK
LSPDMLLITE PDRIIALAGV MGGENTEVTE KTSRILLESA TFDKQSIRKT ARGLKLQSEA
SARFEKGLSY ELAPIALKRA TQLILEIAGG QAASGLIDVL PNKKERNGIV LSLAKVNQIL
GYEKEPPDAC KIAKRLGFIW LPEYVPGMEE FGYGATEDMV RIYPGYWRMD IETDIDMIEE
VARIAGYHTI PCLPLDKAIP KIETPPLPGM KRFLRQILSG YGFQELISYS FTSREMLSRV
SSGAEPEFLA ISNPMSSEQE VMRTSLRPSL YASLAANRRF EKDGLRLYEL GRVYLPKENK
KQEEPEMLCA VIAGGSSQSR WQRNTAGFDF FDVKGIVESM VSRLGLSADF VVSHEHGLSH
GYQAGILVGD MPVGILGQVS PQIADIFDIT EPVYMFEINL SKLITRAMVR RKFNPINRFP
AVERDLALVI DRHITNRQVI DILSEYDLVK NAELFDMYQG KQIAENKKSL AYHLLFQSDT
HTLKDAEVDG VMSQILGRLN TETGAVLRS