Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0327 |
Symbol | |
ID | 5131740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 336428 |
End bp | 338062 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640529227 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001213791 |
Protein GI | 147668973 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00004315 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGCA AAGACCGCCT CAAGAATCGT AAAGAGCTTT CACGCACACG GGTTTCATAT GCCTCTTCCC AGAGGGTAGC CGGTGAAAGC GGGGTTGTTA TTAAGGACTG GGGCGGCAGA TTGCCTCTGG CGGTTGCATA TCCCAATTCT TACTACGTGG GCATGTCAAA TCTGGGACTT CATACCCTTT ACCGCCTGAT AAATAACTAT CCGGAATATC TGGCCGAGAG ATTTTTCTGG GAAGGCGGCA CCGCCAAAGG CCGCCCGACT CTGAGTGTAG AATCACGCCG CCCTCTTACT GATTATGTAG CTCTCTTGTT TACTCTTTCC TACGAACTGG ACTTTCTGAA TATCCCCTCT ATGCTGGCGG ATTGCGGCAT GCCGCTTTAC GCCCGTGAAC GGGACGAGGC TTTTCCGCTG GTTATCGGCG GAGGTGCCTG CATAATGTCT AACCCCTCAC CGGTAGCCGA TTTCTTTGAT GCGTTTTGCA TAGGTGAGGC AGAGGCTATT TTACCCGAGC TTCTGGCGGT GCTTTCCGAA ACGGCAGGCG AATCTAAAGG TTTGATTCTG GAACGTTTGG CTAAAATACC CGGTTTGTAT GTGCCGTCTA TACCGCCAGA ACAGCCTATT GAAAGGGTAT TTCCGTCTGA ACTTACTCAG GGGGTAGGAA CGGCGGTCTT CAGTACAGCT ACCGAACTGG GCGAGATGTA TCTGATGGAA GTGGAACGCG GCTGCGGACA CCAGTGCCGT TTTTGCTTAG TAGCAGGGGT GTTTTGCCCT CTGCGTTACC ACCCTTTGGA ACTGCTGTTA AAACAGGCTG AAGAGGGAAT GCTGAAACGC AAGAGGATAG GTCTGGTGGG ACCGGTGGTT AGTGACCATC CCCAGGTGAC TGAACTTGTC TCCCGCTTGA GGAATATGGG TTTTGGCTTA AGTGTAAGTT CACTCAGGAT AAAACCGCTG TCCGAAAAAA TGCTGGACGA ACTGGCACTT TCAGGTGTTT CCAGTTTGGC TATGGCACCA GAAGCCGGTT CTGAGAGGCT GAGACGGATT ATCCGCAAGG GTATAACCGA AGATGACATA ATACGGGCAG CCGCTCTGGT GGCTGAAAAG GGTTTCCGCC AGCTAAAATT TTATTTCATG CTGGGGTTGC CGGGTGAGGC TGACGAAGAT GTGGAAGAAA TGATAGTACT GGCTGAAAAG GCTCAGCAGG CCATGTCTTC CAAGGGGCGT GGGGTAAGGC TTAGCCTGAA TATTGCTCCC TTTGTGCCCA AACCTGCCAC TCCTTTTCAG TGGCTGGGTA TGGAAGATGC TGCCCTCATA AAGCGGCGGC TGGATACAAT ACGCTTACGT CTGGAAGGGC AGGGGATAGA GGTTCGGGCT GAAAGCCCTG AAATGTCTCA GATTCAGGCG GTGCTTTCCA GAGGTGATTC CAGTCTTTCA AACCTGCTGG CAACGGCGGG AGGTGATTCA CTGGCTTGCT GGAAGCGGGC AGCCAAATCA CTTGAGATAG ACAGCCAGTC TCTGGCTAAA ACCAGGTTTG ATTTGGCAGA TGAACTGCCA TGGCACATGC TGGAAAACCA GAAACAGCGG CAAAAACTGG AAACTGAATA TAAAGCCGCT TTCAAAGAAA TATAA
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Protein sequence | MARKDRLKNR KELSRTRVSY ASSQRVAGES GVVIKDWGGR LPLAVAYPNS YYVGMSNLGL HTLYRLINNY PEYLAERFFW EGGTAKGRPT LSVESRRPLT DYVALLFTLS YELDFLNIPS MLADCGMPLY ARERDEAFPL VIGGGACIMS NPSPVADFFD AFCIGEAEAI LPELLAVLSE TAGESKGLIL ERLAKIPGLY VPSIPPEQPI ERVFPSELTQ GVGTAVFSTA TELGEMYLME VERGCGHQCR FCLVAGVFCP LRYHPLELLL KQAEEGMLKR KRIGLVGPVV SDHPQVTELV SRLRNMGFGL SVSSLRIKPL SEKMLDELAL SGVSSLAMAP EAGSERLRRI IRKGITEDDI IRAAALVAEK GFRQLKFYFM LGLPGEADED VEEMIVLAEK AQQAMSSKGR GVRLSLNIAP FVPKPATPFQ WLGMEDAALI KRRLDTIRLR LEGQGIEVRA ESPEMSQIQA VLSRGDSSLS NLLATAGGDS LACWKRAAKS LEIDSQSLAK TRFDLADELP WHMLENQKQR QKLETEYKAA FKEI
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