Gene DehaBAV1_0323 details

Gene Information

• Locus tag: DehaBAV1_0323
• Symbol: nrdR
• ID: 5131509
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 332516
• End bp: 333043
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640529223
• Product: transcriptional regulator NrdR
• Protein accession: YP_001213787
• Protein GI: 147668969
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000000111081
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTGTC CTTATTGCAG TCACCCGGAT TCCAAGGTGA TAGACTCCAG AGATGTAGAT 
GACGGGGTAC GCCGAAGGCG TGAGTGTGTG GTTTGCGGCC AGAGGTTTAC TACCTATGAA 
CGTTTTCAGC CGGCCGGTCT CTTTGTGGTT AAGAAAGACC AGCGGCGTGA AGAGTTTAAC 
AAGGAAAAGT TGCTGAGCGG TCTCAGACGT GCCTGTGAGA AACGCCCTTT GCCAGCCGGG 
GCGGTGGACA AGGTGGCGGG GGATATAGAG GCCGAACTTT ACAATATGGG CAAGGCCGAA 
ATACCCAGTA CCCTTTTGGG AGATATGGTT ATGGAAAGGC TGAAAATGCT GGATAATATT 
GCCTATGTGC GCTTTGCCAG CGTCTACCGT GAGTTTACTG ATATTACCCA GCTGAAAAAG 
GTAGTAGACA ATTTGGTAAA CGGACAGGAC GAGGGCATAC ACAAAGGGCA ACTTAGTTTG 
TTGCCTGAAG ACAAGGCTGC CCCCAAGACC AGATACCAAA GGAGATAA 

 

Protein sequence

MNCPYCSHPD SKVIDSRDVD DGVRRRRECV VCGQRFTTYE RFQPAGLFVV KKDQRREEFN 
KEKLLSGLRR ACEKRPLPAG AVDKVAGDIE AELYNMGKAE IPSTLLGDMV MERLKMLDNI 
AYVRFASVYR EFTDITQLKK VVDNLVNGQD EGIHKGQLSL LPEDKAAPKT RYQRR