| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0318 |
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| Symbol | trmD |
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| ID | 5131576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 327492 |
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| End bp | 328238 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640529218 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001213782 |
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| Protein GI | 147668964 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000749716 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAATAG ATGTATTAAC CCTTTTCCCT GAGATGTTTC AGTCCCCTTT TGAAGAAAGC
ATTTTCAAGC GGGCAACAGA CAATAATCTG GTAAGGTTAG AAATACATAA CTTCAGGGAT
TTTGCCCATG ACAAGCATCA TGCGGTAGAT GACTCCCCTT ACGGAGGCGG TGCCGGTATG
CTTCTTAAGC CTGAACCGCT GTTTGAGGCG GTAGAAGACG TCCTCAGGGA AGACCCCACC
CCTGCCCCGG TTATCCTGCT CTCCCCTCAG GGACGCTCCT TCAATCAGGA AGTAGCCCGT
GAACTGGCGA AGCACGAACG GCTGATTATA ATTTGCGGCC ATTACGAAGG CTTTGACGAA
CGGGTGCGTG AACATCTGTC CACAGATGAA ATAAGCATCG GTGATTTTGT ACTAACCGGC
GGCGAACTGG CTGCCATGGT AGTTATAGAT GCTGTTTCCC GCCTGATACC CGGCGTGCTT
GGTTCAGGCG AATCCTCACA GGATGATTCC CACTCAAACG GCCTGCTGGA ACACCCCCAC
TATACCCGCC CCCCTGTATT CAGGGGCTGG GGCATACCGG ACGTGCTTCT TTCCGGAAAT
CATGCCCAGA TAAACCGCTG GCGGCGGAAA GAATCTCTCA GGCGTACCCT GAAACGACGC
CCGGATATGT TTGAAAAAAT ACCACTCTCC AAAGCCGACC GAAAACTGGT AGACGAGATT
CTGGCCGAAG AAAACACTCA GGGTTAA
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| Protein sequence | MKIDVLTLFP EMFQSPFEES IFKRATDNNL VRLEIHNFRD FAHDKHHAVD DSPYGGGAGM
LLKPEPLFEA VEDVLREDPT PAPVILLSPQ GRSFNQEVAR ELAKHERLII ICGHYEGFDE
RVREHLSTDE ISIGDFVLTG GELAAMVVID AVSRLIPGVL GSGESSQDDS HSNGLLEHPH
YTRPPVFRGW GIPDVLLSGN HAQINRWRRK ESLRRTLKRR PDMFEKIPLS KADRKLVDEI
LAEENTQG
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