| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0316 |
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| Symbol | |
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| ID | 5131478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 324505 |
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| End bp | 326952 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640529216 |
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| Product | primosomal protein N' |
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| Protein accession | YP_001213780 |
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| Protein GI | 147668962 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0460314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTTTTG CCGAACTGGC CGTAAACACT CCGGTACTTA GACCGGGCAG TTTTTCCTAC
TCCATACCTT TGGGGTTAGA AATCAAACCC GGCCAGGCGG TCTGGGCTCC TTTCGGGCCC
AAAATAGTTC AGGGCATAGT CCTTGAGGTA TCTGACCAGC CGGCATTTGG GCAAACACGT
GAAATCTGCG GCGTTATCTC TGATACGCCG CTTCTTTCTT TTCATCAGCT TAACCTAGCC
GCATGGATAA GCCAAACCTA TTTATGCAGC ATCTACGAAG CCCTTTCCCC CATGCTGCCT
CCGTCTTTTG AACGCCGCAG CGTAGCCTAT ATCAGCCTTG AGCCCTCACC ATTGAATAAA
AGCGAAAAAC CGCCTGCAAC CCTCAGCCCA AGTTTACAAA AAATATTTGA CTGGTTGCAG
ACCAGAGATA TTACCCCTCA AACTGAACTG GAAAATATAT TCGGCAAAAA AACCACCCAA
ACCGCCATAC CAAAGCTGAT AAATCAGGGG CTTATCAACC GAACCTATCA GATAAGCCCG
GTACGGACAC AAACCAAATT TGAAAAACAT TTCGGCCTAA GTGAGCAGGC ACTGGCATTT
ATTAAAGACC AGACACTGAC AAAATTATCT CCCCGCCAGA CCGAGGTTTT TGAGTGCCTC
CGGGAAAACC CGCAAGGCAT TTCCAAAAGC CGGCTGAATT TGCTGGTTAA AAATAATGCT
GCAATCTTGA AAGCTCTGGA GAAGAAAGAG CTAATACTAT CTGAGGAGCA TCAGGTATTC
CGCCAGCCGA TAAATTACAG CCAAATAGAA ACCTTGCCCC ACCTTAAACT GAGCCCTCCT
CAGGAAAAGT GTCTGGAGTC TATCAACCGT TCCCTGAATA CTCCGCCCGA AGATGATCAG
AATCCCCGTA CCTTTTTATT GCACGGAATA ACCGGCAGCG GTAAAACCGA AATATACCTG
CAGGCGCTGG CTGAAGCCCT GCGTCTGGGC AAAAAAGCCA TTGTACTGGT ACCGGAGATA
TCCCTTACCC CCCAGACTAT TGCCCGTTTT GCCGGGCGTT TCCCCGGCAG GGTGGCCGTA
CTTCACAGCC GCCTCAGTCC CGGTGAACAG TTTGACGAAT GGCAAAGGAT AAAAAACGGT
CAGGCCGATA TAGTAATCGG ACCCAGAAGT GCCCTTTTTG CCCCGCTGGA TAAACCGGGT
ATCATCATCA TAGACGAAGA GCACGAATGG ACATATAAAC AGCAGAACTC TCAACCCCGT
TATCACACCC GCACAGTCGC CCTAAAAATG ACTGAAGAAT ATGGTGCAGT TCTGGTGCTG
GGCAGTGCCA CCCCGGATAT TGACAGCTAT TTTAAAGCCC AAAACGGCCT TTACCAGTTG
CTGGAACTGC CCGAACGCCT GACCCCCTAC AGAGGTGCTT CCCTGCCCAA AACCGAGCTG
GTAGATATGC GCACCGAACT TTCCGAAGGC AACCGGAGTA TTTTCTCCCG TAACCTGCAT
GCTTCGATTG AAAAAGTACT GGCAAAACAT GAGCAGGCCA TCCTTTTCAT AAACCGGCGG
GGCGGTGCCA GTTTTATCCA GTGCCGTGAC TGCGGCTATG TAGCCATGTG CAAAAGCTGT
GATACACCGC TTACTTACCA CCCTGACCAG GAAAATCTGG TTTGCCATCA GTGCGGCAGG
CATTATCCCA ATCCCCTCAC CTGCCCGAAC TGCAAAAGCC GCCGGATTAA ATATCTTGGC
ATGGGAACCC AAAAACTGGA GGAAGAAACC GGGCTGGCTT TTCCTCAGGC AAAACTGCTT
CGTTGGGATA GTGATGTTAC CAAAGGCAAA GACTCCCACC AGCAGATAAT GGACAAATTC
AGCCGCCATC AGGCAGACAT ACTCATCGGC ACCCAGATGG TAGCCAAGGG GCTTGACCTG
CCCGGAGTAA CTCTGGTGGG GGTAATAAAC GCGGATATCA GCCTGAACCT GCCGGATTTC
CGGGCAGGCG AACGCACTTT TCAGCTGCTG GCACAGGTAG CCGGACGGGC CGGACGGGGT
CTGGCAGGCG GCAAAGTAGT TATCCAGACC TACACACCTG AAAATTACGC TATCCAGTCA
GCCGTTTGCC ATGATTATCC GGGTTTTTAT GCTAAAGAAA TAGCCTACCG CAGAGAACTG
AATAATCCCC CCTTCCAGAA ATTGGCTTGT CTGGTTTTCA GTCATTTGAA CCATGACTTT
TGTCAGCAGC AGGCTATACT TTTGGCACAA ACGCTTCGGG AAAAGGCTGA TTCGACCGGT
TCAGGCACGC TGGAGATTCT GGGGCCGGCT CCCGCCTTTA TCCAGCGCCT GCGGGGACGT
TACCGATACC AGATAATCCT GCGCTCACCA AACCCGGCCA ATTTCCTCCG GGATATCAAC
CTGGGGCAAG GCTGGAGTAT TGATATTGAT CCATACGGCT TATGCTAG
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| Protein sequence | MAFAELAVNT PVLRPGSFSY SIPLGLEIKP GQAVWAPFGP KIVQGIVLEV SDQPAFGQTR
EICGVISDTP LLSFHQLNLA AWISQTYLCS IYEALSPMLP PSFERRSVAY ISLEPSPLNK
SEKPPATLSP SLQKIFDWLQ TRDITPQTEL ENIFGKKTTQ TAIPKLINQG LINRTYQISP
VRTQTKFEKH FGLSEQALAF IKDQTLTKLS PRQTEVFECL RENPQGISKS RLNLLVKNNA
AILKALEKKE LILSEEHQVF RQPINYSQIE TLPHLKLSPP QEKCLESINR SLNTPPEDDQ
NPRTFLLHGI TGSGKTEIYL QALAEALRLG KKAIVLVPEI SLTPQTIARF AGRFPGRVAV
LHSRLSPGEQ FDEWQRIKNG QADIVIGPRS ALFAPLDKPG IIIIDEEHEW TYKQQNSQPR
YHTRTVALKM TEEYGAVLVL GSATPDIDSY FKAQNGLYQL LELPERLTPY RGASLPKTEL
VDMRTELSEG NRSIFSRNLH ASIEKVLAKH EQAILFINRR GGASFIQCRD CGYVAMCKSC
DTPLTYHPDQ ENLVCHQCGR HYPNPLTCPN CKSRRIKYLG MGTQKLEEET GLAFPQAKLL
RWDSDVTKGK DSHQQIMDKF SRHQADILIG TQMVAKGLDL PGVTLVGVIN ADISLNLPDF
RAGERTFQLL AQVAGRAGRG LAGGKVVIQT YTPENYAIQS AVCHDYPGFY AKEIAYRREL
NNPPFQKLAC LVFSHLNHDF CQQQAILLAQ TLREKADSTG SGTLEILGPA PAFIQRLRGR
YRYQIILRSP NPANFLRDIN LGQGWSIDID PYGLC
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