| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0290 |
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| Symbol | |
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| ID | 5132396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 300086 |
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| End bp | 301930 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640529190 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001213755 |
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| Protein GI | 147668937 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTA ACAAAATCCA GATAAATGAT ATACCTAAGC TCTTTGACAT GTTCTTTAAT
GAATCAAGAG ATGGACTGTT ACTTCTTGAT GCGCCAACTG GAATAATTAA ACTCGCTAAT
CCGGAGTTTC AACATCAAAT ATGTTTGCCC TTAGAAAAAA TCCTTGGCAA ACATATCTGG
GATTTACGCC CTCCCAAAGA CCGCCCGCTT GGAAAAGCAC TCTATCAACA ACGATTTAAC
AGCAATGTTA AACTAAGTAC ACATGAAGTG ATATACAAAC GAGGTGATAA TACCGAGATC
ATTGTGGAAC TCCTTTCTAA GCTACTTGAA TATGACGGCG AAAAAAACTT AATCATAATC
ACCAGGGATG TTACCGGATT AAAACGGTTG GATCGTATTT CACGGATAAC CCAATTTGTC
GTGGATAATG CAGGTGATGC CATTTTCTGG TTGGATAATC TAGGTAACAT AGTATATGCT
AACAACTCCA CTGCACTCCT ACTTGGTTAC AGCAAGGAAG AACTCCTTTC TCTGACCATC
TTTGACATTA ATGTAAACCT TAATCAATTA AATTGGGAAA GCTATTTTAT TGATTCGGGG
AATACCTCTG CAAACAACAA AGAGACTCTT TTCAAAGCTA AGAATAAACA GAATGTCCCT
GTATCTATCA TCAGCAACCG TTTAATATAT GAAGGTGTGG CATATAACTG TGTCTTTGCA
CGTGATCTTA GCGAAAGTAA TCGAAATAAA GAAGCATTAC TTATGACTCA GTTTGCCATT
GATCGCGCTG CCGATTCTAT TTTTTGGTTA GATGACCAGG GACAATTTAT CTATTCAAAT
AATGCTACCT CATTATTACT GGGCTATACC CAAGCTGAAC TTAGTAATAT GCAGATATTT
GAAATTGATA TTAACTTCTC TCGTAGCATT TGGAGAAAAG AATTTAAGAA ACTTAAAAAT
GACACCGCCG GTTACGTAGA AACACTCTAT CGTACTAAAG AAAGTGATTT TATACCGGTT
TCGGTAATGG GAAACTATCT GCAGTATGAC GGTAAAGGTT TTAATTGTTG TTTTGTTCGT
GATCTCAGCA AAGTAAAACA AGCCGACAAG GCTTATCGTA TGGCCCAGTT TGCTATTGAT
ACCTCCGGTG ATGCCATTTT CTGGTTAGAT CGCAATGGTA AGATTATCTA TGCTAATCGA
GCTACTACGG AACTTTTAGG TTATACTGCA AGTCAGCTAT CCAATATGAC TGTAAATCAA
ATAGACCCCA CGGTTGTTTT GGAAGAGTGG CCGAACAGAT TTGATATTCT GAAAAGTATG
GGGTCAGATG TGGTCGAATC CATTTTAAAA ACTAAAGACG GATCAATTTT ACCGGTATCT
ATTATGGGTA ATTATATGTA TTACGATGGT AAAGAGTACA ACTTTGTTTT TGTCCGAGAT
ATCTCTGAAC GGTTAAAAAT TGAAGAATCA CTCAGACAGC AACAGACACT CCTTGAAAAA
ACCGTTTTGG AGCGTACCAG TGAATTGACC GACACAAATT CTCTTCTCCA AGTTGAGATA
ACCGAACGCA AAAATGCAGA GATAAAACTG GAGAAACTGC TTGAGCAAGA GGCCTTTTTA
CGCCAGCAAA TAGAAGGCCA GATGGCCCAA AGGATAGAGT TTACCCGTGC ATTAGTTCAC
GAACTTAAAA CTCCTCTAAC TCCAATATTA GGAGCGAGTG CCATGTTAGC TAATAATTTT
ACTGAAGAGC CATGGCACAG TATAGCTTTG AATATAGAAA ATGGTGCCCA ACATCTAAAT
AAACGGGTTG ACCTGCCCCC GATAGTGATA CCACTTTTTA AGTAG
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| Protein sequence | MKANKIQIND IPKLFDMFFN ESRDGLLLLD APTGIIKLAN PEFQHQICLP LEKILGKHIW
DLRPPKDRPL GKALYQQRFN SNVKLSTHEV IYKRGDNTEI IVELLSKLLE YDGEKNLIII
TRDVTGLKRL DRISRITQFV VDNAGDAIFW LDNLGNIVYA NNSTALLLGY SKEELLSLTI
FDINVNLNQL NWESYFIDSG NTSANNKETL FKAKNKQNVP VSIISNRLIY EGVAYNCVFA
RDLSESNRNK EALLMTQFAI DRAADSIFWL DDQGQFIYSN NATSLLLGYT QAELSNMQIF
EIDINFSRSI WRKEFKKLKN DTAGYVETLY RTKESDFIPV SVMGNYLQYD GKGFNCCFVR
DLSKVKQADK AYRMAQFAID TSGDAIFWLD RNGKIIYANR ATTELLGYTA SQLSNMTVNQ
IDPTVVLEEW PNRFDILKSM GSDVVESILK TKDGSILPVS IMGNYMYYDG KEYNFVFVRD
ISERLKIEES LRQQQTLLEK TVLERTSELT DTNSLLQVEI TERKNAEIKL EKLLEQEAFL
RQQIEGQMAQ RIEFTRALVH ELKTPLTPIL GASAMLANNF TEEPWHSIAL NIENGAQHLN
KRVDLPPIVI PLFK
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