| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0281 |
|---|
| Symbol | |
|---|
| ID | 5132381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | - |
|---|
| Start bp | 293045 |
|---|
| End bp | 294457 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640529181 |
|---|
| Product | reductive dehalogenase |
|---|
| Protein accession | YP_001213746 |
|---|
| Protein GI | 147668928 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1600] Uncharacterized Fe-S protein |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02486] reductive dehalogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATT ATCATTCTTC TGTTAGCCGA CGTGATTTCA TGAAGGCGAT GGGCCTGGTT
GGTGCAGGTA TGGGCGCAGC TACTGCTGTA ACACCGGCAT TCCGCGATCT TGATGAATTA
ACTGCCACTG CGGACCTTAG TGTATATAAT AAATGGTGGA TAAAGGAGAA CGACTTCGGG
CAACTTACCA CCGAGATAGA CTGGAAGGTC TTCAGTTCCT TCGATCCAGC TAAACATCCC
ATGCCGGTAA TGTTTGGCCC CACTGCCAAT GGTGCCATGA GTGCTAAAAA TTTAGCTAAC
CGTAAAAAAC GCCAGACTGA TGGCATACTA AACAAGTGGC CTGGATCTAC TCTACGTGAC
TTGGCCCTTG ATGGTGCTAC GGGCGGTAAC TACCCCTCTA TTCCTTGGAC AGGCCCTAAT
GCCACCACTC CTGAAAGCCG TGGCGTACCC AAATGGGAAG GAACGCCTGA AGACAACACT
ATTATGTGTA AAGCTGCCAC GCACTTCTAC GGCGCACCCA GATGCGGTGC CATTGAGGTA
GATGACAATG TAAAGAAATT CTTTAACACG TCTGTTGTTT GGGAGAACAT CGATACAGCC
TATATAGGTG ATGATGGCAA GCAACATGTA CCCAACAAGT GCAAATGGAT ACTGACCTGG
CTTACCAAAC AGAACCACGC CATGAACAAG TATACCCTGC GCAATGATCC CAATGACCCC
TGGTACAATA CTGTATTCCG TCAAGGCAAA GCCGGTGAAA ACATGGCTTA CTCTCATGCG
CCCCAGATTC AGTACCAGGT AATGGGCTTT CTTAAGGGAC TGGGGTACCA AGCCATCAAG
GCCACTGCTT CCGGTAACAC CCAGTTTGGC GTATGGTCAG GTTTGTGTGA ATCCGGCCGT
ACCACTTATG CCCTTTCACC TGATTATGGT TTGATGGTTC GGTATATTGA TTTTGCTATT
ACCGATCTAC CACTGGCTCC AACCAAACCA ATTGATGCAG GGCTAGCTGT ATTCTGCAAG
AATTGCATGA CCTGCGCTAA GGTTTGCCCT TCCAATACAA TTAGTCTTGA GAAAGAACCC
TCATGGAATA CCAAAGACCC CGGGAACAAT CCTGGACTGA AAACTTGGTA TCTGAATTGG
ACTACCTGTG CCGAATATGG CGGACCCTTT GACTGTGTAA ACTGCCAGAC TGTCTGCCCC
TTCAGCCATG ACAATGACAA GAGTGCTATT CACAATATCA TTCGTGGCAC CGTTGGCACT
ACCCATCTCT TTGATGGTTT CTTTGCCAAC ATGGAAAAAT TTTGGGGCTA TAACACTCAA
CTCAGTGACC AGGCACACAC TGATTGGTGG TATCGTGACC TTGATACTTG GGAACACGAC
ACCCTTTTGG GTTTTGGCAC CAAAGGTTGG TAA
|
|---|
| Protein sequence | MTNYHSSVSR RDFMKAMGLV GAGMGAATAV TPAFRDLDEL TATADLSVYN KWWIKENDFG
QLTTEIDWKV FSSFDPAKHP MPVMFGPTAN GAMSAKNLAN RKKRQTDGIL NKWPGSTLRD
LALDGATGGN YPSIPWTGPN ATTPESRGVP KWEGTPEDNT IMCKAATHFY GAPRCGAIEV
DDNVKKFFNT SVVWENIDTA YIGDDGKQHV PNKCKWILTW LTKQNHAMNK YTLRNDPNDP
WYNTVFRQGK AGENMAYSHA PQIQYQVMGF LKGLGYQAIK ATASGNTQFG VWSGLCESGR
TTYALSPDYG LMVRYIDFAI TDLPLAPTKP IDAGLAVFCK NCMTCAKVCP SNTISLEKEP
SWNTKDPGNN PGLKTWYLNW TTCAEYGGPF DCVNCQTVCP FSHDNDKSAI HNIIRGTVGT
THLFDGFFAN MEKFWGYNTQ LSDQAHTDWW YRDLDTWEHD TLLGFGTKGW
|
|---|
| |