Gene DehaBAV1_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0276 
Symbol 
ID5132094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand
Start bp288132 
End bp289703 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content47% 
IMG OID640529176 
Productreductive dehalogenase 
Protein accessionYP_001213741 
Protein GI147668923 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02486] reductive dehalogenase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAACT TTCATAGTGT GATTAACCGT CGTGATTTCA TGAAGGCACT CGGTCTTGTA 
GGGGCTGGTG CGGGTGCGGC AGCAGCTGTT GCTCCGGTGT TCAGAGACCT AGATGATTTA
GTCGCTTCCC CCACTGCAAC TTTCCCGCGT GCTTGGTGGA TTAAGGAACG TGACCTGTGG
GATATTACCA CCGAATATGA CTGGAAAGCT ATGTCCCGGC ATGATACATG TGAAACCATG
TGGATAAAAC ATTCATGGGC AAAATATGTA GGTGTTGACA AGGTTAAAGA AGCTGCCGCC
AGTGCAGCCG CAATCAAAAA AGAAGCTCTG GAAACTGGTA AACCGGGCAT GGACTTAAGA
GCAACTGCCC TGGGTAGTAC CTCTGGTTTG TATAATGCTC CTCAACCGTA TTTCTCATAT
ACTAAAACTG CTCAGGGTTG GGGTGGTGGT AAGAGTTTCA CCGGTCAATC TACCATAAAA
GGGCCTGATG TACTGGGAGT ACCCAAGTGG CAGGGTGATC CTGATGCTAA CCTCAGGATG
TTGCGAGCGG CTTTACGCTT CTATGGCGCT GCCCAGATTG GCGTAGTTCC CTACGATACA
AATGTAAAGA ATAAATTAAC CTGTGTTCGC GAAGGTGGCA TGGCCTCTAT GAGCGATAAA
TACATTGAAA AATGGCCTAT ACCCGCTGTA GATGCCCGTC CGTTTGTGTT CGAAGATGTT
GAAAAAGGCT ATGAAACCGC TGAAAAGCTG GTGATTCCGG ACAAAAAGGA ACTTTTTGTG
GTTTCAGTTA TTCAGCCTAT GAGCCGCGAA ATGTGGCGAC AGGGTAGCGG CAATTTGAGA
GTGGCAACTA ATGGTCACCG TTATAGTCTG GCATCTGTTT GGCAAACCAA AATTCAAGGC
TTCCTGACGA CCCTTGGTTA TCAGGGTTTG GGTTATCCTA CCAGGGCTTA TGGACCCATG
CCTACTATTC CTGGGTTTAT TTTCTCTGGT TTAGGTGAAC TTGGGCGTTC AAATAATGTC
TGTTTGAGCC CTGAATACGG TTCAACCCAC GGATCATTCC ATTTCCTGAC AGATTTGCCG
TTAACTCCTA CCAAACCTAT AGATGCCGGT ATGTGGCGGT TCTGTAAGAC TTGTGCTATT
TGCGCTGAAA ACTGTCCTTC GCAGTCTATT TCATATGACA AAGAACCCTC ATGGGAAATC
ACTCCTTCCA AGTATGCTCC CAATGTTCCG GTAGAATACA GTGTTCCGGG CAAAAAGGTT
TTCTGGCGTG ATGAACCATC TTGCAAACAG TGGACTGAGA GTTGTGGTTA TTCCTGTGGT
ATCTGCATGG GTTCCTGCGT GTTCAACGTG GACAATGCCT CCATGATACA CCAGGTAGTT
AAAGGTACTA TTGCTACCAC CAGTCTCTTC AATGGTTTCA TGAAACAGGC TGACAAGTTC
TTTGGTTATG GACTTACACC TGAGTCTGAG TGGAACAATT GGTGGGACAT GAATCTGCCG
GCCTATGCTT TTGATACTAC TGTTGGTGTT ACTGATGGTG GTTACAAAGC CAAAGGCCTG
CTGCAGCAAT AA
 
Protein sequence
MANFHSVINR RDFMKALGLV GAGAGAAAAV APVFRDLDDL VASPTATFPR AWWIKERDLW 
DITTEYDWKA MSRHDTCETM WIKHSWAKYV GVDKVKEAAA SAAAIKKEAL ETGKPGMDLR
ATALGSTSGL YNAPQPYFSY TKTAQGWGGG KSFTGQSTIK GPDVLGVPKW QGDPDANLRM
LRAALRFYGA AQIGVVPYDT NVKNKLTCVR EGGMASMSDK YIEKWPIPAV DARPFVFEDV
EKGYETAEKL VIPDKKELFV VSVIQPMSRE MWRQGSGNLR VATNGHRYSL ASVWQTKIQG
FLTTLGYQGL GYPTRAYGPM PTIPGFIFSG LGELGRSNNV CLSPEYGSTH GSFHFLTDLP
LTPTKPIDAG MWRFCKTCAI CAENCPSQSI SYDKEPSWEI TPSKYAPNVP VEYSVPGKKV
FWRDEPSCKQ WTESCGYSCG ICMGSCVFNV DNASMIHQVV KGTIATTSLF NGFMKQADKF
FGYGLTPESE WNNWWDMNLP AYAFDTTVGV TDGGYKAKGL LQQ