Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0276 |
Symbol | |
ID | 5132094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 288132 |
End bp | 289703 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640529176 |
Product | reductive dehalogenase |
Protein accession | YP_001213741 |
Protein GI | 147668923 |
COG category | [C] Energy production and conversion |
COG ID | [COG1600] Uncharacterized Fe-S protein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR02486] reductive dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAACT TTCATAGTGT GATTAACCGT CGTGATTTCA TGAAGGCACT CGGTCTTGTA GGGGCTGGTG CGGGTGCGGC AGCAGCTGTT GCTCCGGTGT TCAGAGACCT AGATGATTTA GTCGCTTCCC CCACTGCAAC TTTCCCGCGT GCTTGGTGGA TTAAGGAACG TGACCTGTGG GATATTACCA CCGAATATGA CTGGAAAGCT ATGTCCCGGC ATGATACATG TGAAACCATG TGGATAAAAC ATTCATGGGC AAAATATGTA GGTGTTGACA AGGTTAAAGA AGCTGCCGCC AGTGCAGCCG CAATCAAAAA AGAAGCTCTG GAAACTGGTA AACCGGGCAT GGACTTAAGA GCAACTGCCC TGGGTAGTAC CTCTGGTTTG TATAATGCTC CTCAACCGTA TTTCTCATAT ACTAAAACTG CTCAGGGTTG GGGTGGTGGT AAGAGTTTCA CCGGTCAATC TACCATAAAA GGGCCTGATG TACTGGGAGT ACCCAAGTGG CAGGGTGATC CTGATGCTAA CCTCAGGATG TTGCGAGCGG CTTTACGCTT CTATGGCGCT GCCCAGATTG GCGTAGTTCC CTACGATACA AATGTAAAGA ATAAATTAAC CTGTGTTCGC GAAGGTGGCA TGGCCTCTAT GAGCGATAAA TACATTGAAA AATGGCCTAT ACCCGCTGTA GATGCCCGTC CGTTTGTGTT CGAAGATGTT GAAAAAGGCT ATGAAACCGC TGAAAAGCTG GTGATTCCGG ACAAAAAGGA ACTTTTTGTG GTTTCAGTTA TTCAGCCTAT GAGCCGCGAA ATGTGGCGAC AGGGTAGCGG CAATTTGAGA GTGGCAACTA ATGGTCACCG TTATAGTCTG GCATCTGTTT GGCAAACCAA AATTCAAGGC TTCCTGACGA CCCTTGGTTA TCAGGGTTTG GGTTATCCTA CCAGGGCTTA TGGACCCATG CCTACTATTC CTGGGTTTAT TTTCTCTGGT TTAGGTGAAC TTGGGCGTTC AAATAATGTC TGTTTGAGCC CTGAATACGG TTCAACCCAC GGATCATTCC ATTTCCTGAC AGATTTGCCG TTAACTCCTA CCAAACCTAT AGATGCCGGT ATGTGGCGGT TCTGTAAGAC TTGTGCTATT TGCGCTGAAA ACTGTCCTTC GCAGTCTATT TCATATGACA AAGAACCCTC ATGGGAAATC ACTCCTTCCA AGTATGCTCC CAATGTTCCG GTAGAATACA GTGTTCCGGG CAAAAAGGTT TTCTGGCGTG ATGAACCATC TTGCAAACAG TGGACTGAGA GTTGTGGTTA TTCCTGTGGT ATCTGCATGG GTTCCTGCGT GTTCAACGTG GACAATGCCT CCATGATACA CCAGGTAGTT AAAGGTACTA TTGCTACCAC CAGTCTCTTC AATGGTTTCA TGAAACAGGC TGACAAGTTC TTTGGTTATG GACTTACACC TGAGTCTGAG TGGAACAATT GGTGGGACAT GAATCTGCCG GCCTATGCTT TTGATACTAC TGTTGGTGTT ACTGATGGTG GTTACAAAGC CAAAGGCCTG CTGCAGCAAT AA
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Protein sequence | MANFHSVINR RDFMKALGLV GAGAGAAAAV APVFRDLDDL VASPTATFPR AWWIKERDLW DITTEYDWKA MSRHDTCETM WIKHSWAKYV GVDKVKEAAA SAAAIKKEAL ETGKPGMDLR ATALGSTSGL YNAPQPYFSY TKTAQGWGGG KSFTGQSTIK GPDVLGVPKW QGDPDANLRM LRAALRFYGA AQIGVVPYDT NVKNKLTCVR EGGMASMSDK YIEKWPIPAV DARPFVFEDV EKGYETAEKL VIPDKKELFV VSVIQPMSRE MWRQGSGNLR VATNGHRYSL ASVWQTKIQG FLTTLGYQGL GYPTRAYGPM PTIPGFIFSG LGELGRSNNV CLSPEYGSTH GSFHFLTDLP LTPTKPIDAG MWRFCKTCAI CAENCPSQSI SYDKEPSWEI TPSKYAPNVP VEYSVPGKKV FWRDEPSCKQ WTESCGYSCG ICMGSCVFNV DNASMIHQVV KGTIATTSLF NGFMKQADKF FGYGLTPESE WNNWWDMNLP AYAFDTTVGV TDGGYKAKGL LQQ
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