| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0260 |
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| Symbol | |
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| ID | 5131515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 267098 |
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| End bp | 269017 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640529161 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_001213726 |
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| Protein GI | 147668908 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3568] Metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.61014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TTTTTCAAGA AAAACCGGGT GCAGTGGAAT TTTTATTGCC GGCGCTGGTT
TTTACACTGG CGATAAGTTT GTTTCCTTTA TTCGGTTCGG GTATGACCTG GATATTGGGA
GACCGCTTCG GGCAGGGGGC AGGAGTGCTG GGGTTAATAG CCCTGACTGT TTTCAGCCTG
TCATTTTTGG CCAAACCCCT GCGCCGTTTT TTATGCAGTT ACAAAGCCAT TATTTTTAGT
GCTGGCGGAG TGGGTATACT CAGCCTGCTG GCCCAGATAG GTTTTTCCGA GCCTCTTTTA
AATTTTGTCT GTTCCGCTTT GGGATTGTCT CTTTTCGGTA TTTTCCTGTG TGTTTATCTG
GATAGTGCCC GGGTGCGCGG TCCGTCTGCG GTGGGGCATT TCGGGGCGGG TGCTGTCTTC
GGATTACTGC TGAATGCCGC CCTGTCTGCC GGATTTGGTA CCTATGACCT GCTCAACCAG
CCTTCATTTT TTCCTTTGCT GGTTAGTGCT GTAATGGTGG GCTTTTTATT GTTTTTGCTT
ACGGTGCATA TGCCTCTGGC TGAGGGGCCG GCTGCCAGTA ACGACGGCCT TGGCTGGCTG
GCAATAGGGC CGTTCCTCTT TTTAGAGTTG GTAGTCTTCG GGAATATTGC CCGTTTGTCT
GCTCTTAGCG GTTTTTCCAG TCCGGTGGCT TCAATGTTTG TACTAGGGGC GCTTTCACTG
GGTTTAGTAG GTATACTCTG GGTATTGTCA CTCTCTGAAA GACACATCCG GCTGCTTACC
CTGATATCCA GTCTGTGCCT GATACTCTCC CTGACCGGTA TTTCTGATGG AGTGGCTTTT
GTAAGCCTTA TCCAGCAGGT ACTGGGGCAA TTGGCAGTGG TACTCCTGTT TGGGGTGATT
CTCCGCTATA TTGGCGGCAG GAAGGCTGAC GGGCATTCTG AAAGTCTGAA TCTGCCTAGC
GGTCTGGGTA TGCTTGTATT CGTTATATTG CTGCTGGGAT ATTACGCTGT CTATCAGGTG
GCTGTGCCGT ATGACAATAC AGTTCTGGAG CTGGTAGCCG GACTGATAGT GGTGGGTTTG
GCCCTGTATT CCGGGCGGGA GAGCCTGCCT CTGCTGGATT TCAAGAGTGA CAGGTTCATT
TTACCGGCCA TGTCAGTTTT GCTTTTGACT CTGCCTCTTT TAGGTTTGCT TACATATAAA
ACACCTCCGT CTCCCCCTCA ATTTGAGGGC AGTCTGCGGA TTATGACTTA TAATTTACAT
AACGGGTTTA ATACTCAGGG TAAGCTGGAT ATGGAAGCTC TGGCAAGGGT GATTGAAGAC
AGCGGGGCGG ATGTGGTGGC TTTACAGGAG ATTTCCCGCG GCTGGGTGAT AAGCGGACGG
GTGGATATGC TTGAGTGGCT TTCCCAGCGG CTGAATATGT ACTCTGCTTT TGGGGCTACG
GCCGGTGAAT ACTGGGGTAA TGCCATACTG TCAAAATACC CCATTCTGGA TACCCATAAT
ATCAGTCTGG AAAGTGAAGG ATTGCCTATC AAACGGGGCT ATCTGAATGC AGTGCTGGAT
TTGGGCGGCA GGTATCTGTA TCTGGCGGCT ACCCATTTGC ATCATGTACC TGAAGAAGGA
GATGTGCGCC TTATTCAGGC AGGGGAGCTG GCAGATTTTT GGGATAATGC TCCTGCAACT
ATAATACTGG GTGATTTTAA TGCTGAACCG GATTCGGAGG AGATAGGTTT ACTGCGGCAG
GCTGGTCTTT CTGACAGTCT GGAAGGGCAG ACATCTGTCC TTACTTACCA TTCAGCAGAC
CTGTACCAGC GGATAGATTA TATCTGGGCT TCGCCTGAAA TAGAGTATAT AGATTCATAT
ACCATTGTTA GCTTGGCATC GGACCATCTG GCTATCATAG CGGATATACG GCTTTCCTGA
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| Protein sequence | MKKFFQEKPG AVEFLLPALV FTLAISLFPL FGSGMTWILG DRFGQGAGVL GLIALTVFSL
SFLAKPLRRF LCSYKAIIFS AGGVGILSLL AQIGFSEPLL NFVCSALGLS LFGIFLCVYL
DSARVRGPSA VGHFGAGAVF GLLLNAALSA GFGTYDLLNQ PSFFPLLVSA VMVGFLLFLL
TVHMPLAEGP AASNDGLGWL AIGPFLFLEL VVFGNIARLS ALSGFSSPVA SMFVLGALSL
GLVGILWVLS LSERHIRLLT LISSLCLILS LTGISDGVAF VSLIQQVLGQ LAVVLLFGVI
LRYIGGRKAD GHSESLNLPS GLGMLVFVIL LLGYYAVYQV AVPYDNTVLE LVAGLIVVGL
ALYSGRESLP LLDFKSDRFI LPAMSVLLLT LPLLGLLTYK TPPSPPQFEG SLRIMTYNLH
NGFNTQGKLD MEALARVIED SGADVVALQE ISRGWVISGR VDMLEWLSQR LNMYSAFGAT
AGEYWGNAIL SKYPILDTHN ISLESEGLPI KRGYLNAVLD LGGRYLYLAA THLHHVPEEG
DVRLIQAGEL ADFWDNAPAT IILGDFNAEP DSEEIGLLRQ AGLSDSLEGQ TSVLTYHSAD
LYQRIDYIWA SPEIEYIDSY TIVSLASDHL AIIADIRLS
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