| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0247 |
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| Symbol | |
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| ID | 5132012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 252226 |
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| End bp | 254028 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640529148 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001213713 |
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| Protein GI | 147668895 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000139263 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAAA CAAAAAAGCC TGTAGAAAAA CTGGAACCAG CCGAGGAAAC CAAAAAGGAC
GGTAAGGTAG TTTCTACCAA GCGCACCAAG GGCAGTGAGT TTTTTTGGAC ACAAAGCCGC
TGTACCGGGT GTAACCGTTG TGCCAGCGTC TGCCCGGTAG ATGCTATCAA ACTGGAGCGG
GATAAAATGC CCACCAAGCG GGTTGGCACT TCTCCCTGCA CCCGTGCCTG CCCTGCCGGA
CTGGATATCC CCCGCTACGT GCGTTTCGTA GCTGATGGCA ATGCTCCAGC CGCTACCGCC
GTTATGAGAG AAAAAATACC CTTCCCTTCA GTGTGCGGCT ATGTTTGTTT CCACCCCTGT
GAACTGGAGT GCCAACGCCA GAAGTTTGAT GAGCCCATTG CTATTCGGGC ACTCAAGAGA
TATGCCGCTG AAAATGATGA CGGCAGTTGG AAAAACAACC TCAAAATTGC CCCGCCCACC
GGCAAAAAAG TGGCTATCAT CGGTTCAGGC CCGACCGGCC TTACCTCTGC CTACTTCCTG
ACCCTGCTGG GGCATGAGGC TACTATATTT GAATCCATGG AATATGCCGG CGGCAAGATG
TTTTACAGCA TACCGGAACA TCAGCTGCCC AAAGAGATAC TCAACAAAGA AATTAAGACT
ATCACCGACT TGGGTGTGAC CATTCATACC TCCTGCCAGG TACAATCCGT ACAGACCCTG
TTTAAACAGG GCTACGACTC GGTTTTGCTC TCCACCGGGG TACTCGGCGT AGACGAAGGG
CTGTTGCTTC CCTGTGATGA AACTGCCAAA TCAGACCTGA TTAAGGGCAG TGATTTCCTG
AAGGGCATAA AATCAACCAC TAAAGAAACC CTTGGCGACA AGGTAATCGT AATAGGCGGC
GGCAGTGAAG CCTACAATAG TGCCTTTGCC GCTAAAAATC TGGGTGTCTC CGAGGTGAAT
CTGGTTTGCA GCCGCCATAC CGGCAGCAAG GAAGCTTCTC CCGAAGAAGT TGACCGCGCT
ATAGATGCGG GCGTAACTGT TCAACCTTCG CTGGATTTTG TAAAGCTGGT AAAGCTAAAT
GACAAGATTG AGGGAGTTGA ACTGTTCCGT ATCCGTTCTT ACGGATATGA CAAAGAAAAT
AAACTCCATT ATGAAATAAT AAACGATACC CGCCGTTTGA TATCTGCAGA TACCATTATC
ACCACTGTAG CCCAAAATGA TAAACCCGGT TCGGATTATC TGTCTGTGGT TCAGCCCGGC
GTATTTGCCG CCGGTGACGG CATCAGCGGT GCCCGTTCGG TTATTGAGGC TATGGCCGCC
GGACGTTCGG TAGCCGGTCT GATTGACAAA TATTTAGGGG GCGAAGGCAA TCTGGATGAA
ACTCTGGCTC CGCCTGAAAA AACCATCAAA CCACTTGGCG AACCCAAGAG TCAAAACCGC
TCTCAGGTAG AGCTTAATCT GGTTAAACAG GCCGGCGGTG ACAAGGTGGA AATTGAAAAA
ACCCTGTCTC CCAATGCTGC CAAAAAAGAG GCTCAGAGAT GCCTTAGGTG TGATATTGTC
CATCAGGTAC ATGACTATAG TCTGGATACC TCCAGTTGCA CTTACTGCGG ACGGTGTGTA
GATGCCTGTT ACTGGGATGC TATTACCAAC GGTTACGGTT ATGAGGCTGC CGCCAAGAAA
CGCAAGGCAG AGGCAGCCGC TCTGGAAGAA AAGAATAGTG TATACAACTA CGCTATCCGT
ATTCTGCCCA TTGCCATAGG CCTGATGATA CTGGCCGCTG CCATTGCCAA ACTTTCTACT
TAA
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| Protein sequence | MAKTKKPVEK LEPAEETKKD GKVVSTKRTK GSEFFWTQSR CTGCNRCASV CPVDAIKLER
DKMPTKRVGT SPCTRACPAG LDIPRYVRFV ADGNAPAATA VMREKIPFPS VCGYVCFHPC
ELECQRQKFD EPIAIRALKR YAAENDDGSW KNNLKIAPPT GKKVAIIGSG PTGLTSAYFL
TLLGHEATIF ESMEYAGGKM FYSIPEHQLP KEILNKEIKT ITDLGVTIHT SCQVQSVQTL
FKQGYDSVLL STGVLGVDEG LLLPCDETAK SDLIKGSDFL KGIKSTTKET LGDKVIVIGG
GSEAYNSAFA AKNLGVSEVN LVCSRHTGSK EASPEEVDRA IDAGVTVQPS LDFVKLVKLN
DKIEGVELFR IRSYGYDKEN KLHYEIINDT RRLISADTII TTVAQNDKPG SDYLSVVQPG
VFAAGDGISG ARSVIEAMAA GRSVAGLIDK YLGGEGNLDE TLAPPEKTIK PLGEPKSQNR
SQVELNLVKQ AGGDKVEIEK TLSPNAAKKE AQRCLRCDIV HQVHDYSLDT SSCTYCGRCV
DACYWDAITN GYGYEAAAKK RKAEAAALEE KNSVYNYAIR ILPIAIGLMI LAAAIAKLST
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