| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0239 |
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| Symbol | |
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| ID | 5131999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 242759 |
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| End bp | 243331 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640529141 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001213706 |
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| Protein GI | 147668888 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTT CAAACTACCG TAACCAGCCG GATGTCATAC TTCTGATAAT AATCACCTGC
GTGGTTGTAT TCTTCGGGGT TAATTTCGTT CCTCAGCTTG GGCCGTACCT TGCGCTTCAA
CCTGCAACCG CCATCAGCCA CCCTTGGACT ATTGTAACCA GCCTGTTTGT CCACGCAGAC
CTCTGGCATC TTTTTGCCAA TATGCTCACC CTGTATTTCT TCGGCAATGC CCTGCTCCAG
ATGATAAGCC AGCGCAGTTG GCTGATAATA TTCTTCGGGG GCGGTCTGGC AGGCAGTTTG
CTGTTTATAC TACTAAACGC CGGTTCATAC GGATATGTAA TAGGTGCTTC AGGGGCGGTT
TTTGCACTTG GCGGAGCTCT GGCAGTACTT CGCCCGAACT CCAAGGTTAT GGTCTTCCCT
CTGCCAATAC CCATCCCTCT CTGGATTGCA GTCATTGGCA GCTTTATTAT CCTGTCCTTC
CTTCCGTCGG TTGCCTGGCA GGGACATCTG GGGGGATTAC TCGTCGGGCT TGCCTGCGGC
TACCTTATCC AGCAGGGTAA ATTCAAGTTT TAA
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| Protein sequence | MKFSNYRNQP DVILLIIITC VVVFFGVNFV PQLGPYLALQ PATAISHPWT IVTSLFVHAD
LWHLFANMLT LYFFGNALLQ MISQRSWLII FFGGGLAGSL LFILLNAGSY GYVIGASGAV
FALGGALAVL RPNSKVMVFP LPIPIPLWIA VIGSFIILSF LPSVAWQGHL GGLLVGLACG
YLIQQGKFKF
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