| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0225 |
|---|
| Symbol | |
|---|
| ID | 5132092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | - |
|---|
| Start bp | 231062 |
|---|
| End bp | 232315 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640529127 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_001213692 |
|---|
| Protein GI | 147668874 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACT TGAAGATTAT TACCCGCCAT CTGAACACTG CCAATTCAGC GGATATTGAT
GTCTATCTGG CTGACGGCGG CTACCAGGCC CTCAAGAAAG CTTTGTCTAT GACCCCGGAG
GAAGTGATTG CCGAGGTCAA ACGCTCAAAG CTGGTGGGTC GGGGAGGGGC GGCTTTTCCC
ACCGGGCTCA AGTGGGAGCT TACCCGCAAA GAAAAGGCCA ACCCGAAATA TATTGTCTGC
AATGCCAGCG AGGGCGAACC GGGCACTTTT AAAGACCGGT TAATACTCAA AAATGACCCC
CATATGGTGC TGGAAGGTTT TATTATTGCC GCTTATGCGG TAGGTACATC TCAGGGCTTT
ATTCACGCCC GCGAGGTTTA TACCCAAGAA ATAGAGCTTT TCCAAAAGGC CATAGACCAG
GCAACCGAAC GCGGTTTTCT GGGTCAGAAT ATCATGGGGA GCAATTTCTC GCTGGATATC
CAGTTTTACA AAAGCGCCGG TGCGTACATC TGCGGTGAGG AAACCGCCCT GTTTGAGTCC
CTTGAAGGGC ACAGGGGCAT TCCCGCCACT CGTCCGCCTT ACCCGGTGCA GGTGGGGCTT
ATGGATAAAC CCACCACCGT CAACAATGTT GAAACATTGT GCAATATTCC TGCCATTATA
AATAACGGGG CAGACTGGTT TGCTTCAATC GGCCATCCGG ACTATCCCGG TACCAAGCTC
TTCTGCCTTT CCGGCAACGT GAAAAAGCCG GGTGTTTTTG AATTGCCACT GGGGACTAAC
CTTAAGGACT TGCTTGAGGC CGGGGGGGGC GTAGACGGTA AGTTCAAAGC GGTTTTACCG
GGTGGCATAT CTTCCAGCCT GCTTACCGAA ACGGATATCA GTCTGGATTT CAAGACTCTG
GCCAAGGCCG GTACTATGCT GGGTTCAGGT GCGGTTATTG TGATAAACTC TGATACCAGC
ATGGTAAATG TAGCGTCCAA TGTCGCCCAC TTCTTTGATG AAGAGGGTTG CGGCAAGTGT
TCTATTTGCC GCGAAGGTAC CCGCCGGGCG GCTGAAATCC TGAGCCGTTT TTCCCGCGGG
CAGGGTAACC GCAACGAACT GGAGTGGTTA CTGGAACTGC ATGAGGTAAT GAAAGACACC
GCTTCCTGCG GTTTGGGACA GGTAGCCTTG AATGTGGCTG CCAGTGCCAT CCGTAACTTC
AAGGGTGAAT TCTTAGCTCA GGTGCGTAAG GAGGAAGGCG TATGGTTACG CTAA
|
|---|
| Protein sequence | MKDLKIITRH LNTANSADID VYLADGGYQA LKKALSMTPE EVIAEVKRSK LVGRGGAAFP
TGLKWELTRK EKANPKYIVC NASEGEPGTF KDRLILKNDP HMVLEGFIIA AYAVGTSQGF
IHAREVYTQE IELFQKAIDQ ATERGFLGQN IMGSNFSLDI QFYKSAGAYI CGEETALFES
LEGHRGIPAT RPPYPVQVGL MDKPTTVNNV ETLCNIPAII NNGADWFASI GHPDYPGTKL
FCLSGNVKKP GVFELPLGTN LKDLLEAGGG VDGKFKAVLP GGISSSLLTE TDISLDFKTL
AKAGTMLGSG AVIVINSDTS MVNVASNVAH FFDEEGCGKC SICREGTRRA AEILSRFSRG
QGNRNELEWL LELHEVMKDT ASCGLGQVAL NVAASAIRNF KGEFLAQVRK EEGVWLR
|
|---|
| |