| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0214 |
|---|
| Symbol | |
|---|
| ID | 5132162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 220889 |
|---|
| End bp | 221284 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640529115 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001213681 |
|---|
| Protein GI | 147668863 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1396] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGAGA ACTTCGGTGA ATATCTCCGT ACCCTGAGGG TTGAGAAAAG GCTATCACTG
CGGGAAGTTG AGCAGCAGTC CGGCGTCTCG AACTCATACC TGGGACTCAT CGAACGCGGT
CAGCGACCTA TACCGGGCGC AGATATCCTG AAGAAGCTCG CTCCCGTCTA CGATGTGCCG
GTGAGGGATT TACTCAAGGC TGCCGGGTAC CTGAAAGACG AAGACATCTC TATAAGCGAG
AATGATGAAA TTGAGATGGC CTTCAACTAC GTGATGAATG ATCCCAGATA TAAATCCGGT
ACCCGCATCA AGGGTGGGCT TACTACCGAT GTCAAGCGTT TCATCGTAGA GATGTACGAG
AAGGCAACCG GTAAGAAGCT TTTGCCTGGA GGATAG
|
|---|
| Protein sequence | MMENFGEYLR TLRVEKRLSL REVEQQSGVS NSYLGLIERG QRPIPGADIL KKLAPVYDVP
VRDLLKAAGY LKDEDISISE NDEIEMAFNY VMNDPRYKSG TRIKGGLTTD VKRFIVEMYE
KATGKKLLPG G
|
|---|
| |