Gene DehaBAV1_0183 details

Gene Information

• Locus tag: DehaBAV1_0183
• ID: 5132422
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: -
• Start bp: 187849
• End bp: 191217
• Gene Length: 3369 bp
• Protein Length: 1122 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640529086
• Product: helicase domain-containing protein
• Protein accession: YP_001213652
• Protein GI: 147668834
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1111] ERCC4-like helicases

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.482568
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACAG ACACTACATT TATTACAAAC GAGGGTAATA AGAAACTTAA GGATAGAATT 
GCCGAACTGA TTGCACACAG CAAAGAATTG AAGTTCCTCG TCGGTTTTTT CTATTTCTCT 
GGAATACGGG AGCTCTACAC CTCCCTAAAG AATAATCCCA ATATCCAACT TGATGTACTC 
GTCGGATTAA ATGTTGATAA GACTGTACAT GGGCTGACCG AATATGGTGA TACTACCAAA 
GGACTAACGG ACAAGGAAAA ATTTGAGCAG TTTCTCGGCT CTATTTCAAA ATCCATAAAC 
TCCGATGACT TCGATAACCA GGTTTTCTAC GATCAGGCTA GATTCTTCTT AGAAGCTATA 
AAACAAGATA AGCTCAGAAT CCGAAAAACC TACGATCCTA ATCATGCCAA GTTATATATC 
TTCAAACTTA AAGATGAACT CGCGACTATA AAGAAAGCCT TCTTCATTAC CGGCAGCAGC 
AACCTGACAA AGGCAGGATT GTCTCATCAG AATGAATTCA ACGTGGAAAT CAGCGACTAT 
GGTGCTAAAG AAGCTGAAGA CTATTTTGAT GAGCTTTGGG AAGAAGCTGT TAAAGTAACC 
GAGATAGCCA GTTTTAAAGA TAGATTGATA AACCTTCTTG AGAAAAAAAC CCTACTAACG 
GAAGTTACTC CTTATGAGGC ATTTGCCCTA GTATTGAAGA CTTATATAGA GTTACAAGAA 
CAAAAGCAGA TAAAGCAAAG CTTGGTTGAT TTGTTAAAGA AAAAAGGCTA CCGGGCGTAT 
AAATACCAGA CTGATGCCGT AGCGCAGGCC ATATCAATCC TAGACCAGTA TAAAGGTGTG 
ATAGTCGCTG ATGTTGTAGG TCTAGGGAAA AGCATTATTG CCGGGCTGAT TGCCAAGAGT 
CTGGGTAAAC GAGGTATCAT CCTTTGCCCT CCAGGTCTTA TTGGCGATGA CAATGCTGCG 
AGTGGTTGGA GGAAATACAG AGAAGACTTC GCATTGCATG ACTGGGAGAT TCGTTCATCC 
GGGCTGGAGA ACCTGAAGAA AGCTCTGGAC CTCGTTCGTT CTAATCCCGA ATACGAGGTT 
GTCATCATTG ATGAAGTGCA TCGTTTCAGG AACCAGGATA CTGAGGCCTA TGAAGTATTG 
AGTAATATTT GCAGAGACAA GTTGGTAATC ATGCTCACCG CAACACCGTT TAATAATACC 
CCTGCCGATA TATTATCCCT GCTAAAGTTA TTCATTGTGC CAGGCAAATC CAATATCACT 
TTGGCCAATG ACTTGACCGC GAGATTCAGA TCATATACTC AGACTTTCCG GCGTCTTTCC 
AATATCAGAA AGAACTGTAA TTCCCCCAGC CTACCGAAAA GAAATCAGGC TATTGCTGAT 
TACGAGGTAA TGTTTGGGGC AAACAAAATA GACTTGAATA ATGTGAGAGA CAGGACAAGA 
TACCTCTCTA AAAGCATCCG TAACGTGATT TCACAGGTTA CGATTAGACG TAACCGAATT 
GATCTGAGAA AAGATCCTGA ATACTCAAAG GAAATATATG AGCTTTCTGA CGTTCAAGAC 
CCATGTGAGA TATTTTATGA GCTTACGCCT GAGCAGTCTG AATTCTATGA TAGGGTGCTA 
CAAGATTATT TTGGGGAGCG AGGGCAGTTC ACCGGCGCCA TCTATCAGCC GTTCCTTTAT 
GAAACAGGAC AGCTTGAGCC TGACGAAGAG ACCCTAAATC AGGCGGAAAA TCGCGAATCC 
TTAATACAAC GGAACTTGTA TGATTTCATG AGGCGGTTAC TGGTCAAGAG ATTCGAGAGT 
TCATTCGGTT CATTCCGACA GAGCATCATC AATTTCAAAT CAGTCACCGA AAAGGTGCAG 
ACGTTTATTG AGAATTCCAA CGGTAAATAT ATTCTGGACC GCCCTTTGCT GGAGAAGATA 
TACGAGGCGG ATATCGATGA GATAGAGGAA GAACTGGCAG GCTTTGAACA GCGTATTAGT 
GAAGGGACTT TCCCGAAGAC AGAAAAGGTC TATAAAGTCA ATGACTTTAT TTCAAAGGAC 
AAATTTAATA CCGACATTCA ATCCGATATC GATTTATTTG ACCAGATTCT AGACGAACTC 
GATTCGTTGA AATTAGTCAA TAAAGACCCC AAGTTAAAGA AGCTGGCTAC TGAAGTTAAA 
AATATCCTGA AGAAGAAGGA TAATCCGGAG GAGCCTGAAC GAAAGATAGT CATCTTTACT 
GAATATATTG ATACGGCTAG ATATTTGGAA GCTTACCTTG AAAAAGAATT CCCCTCCTGC 
TGCATTACTG TCAAAGGAGA TTTGAATAAA ACGAAATCAG ATGAGGTCTT GAGAAACTTC 
GACACCACTC ATAAAAAGCC TGAGGACAGC TACAAAATAC TAATTACCAC GGATAAGATG 
TCCGAGGGCT TTAACCTCAA CCGTGCAGGG GCAGTTATTA ATTACGATAT CCCCTGGAAT 
CCCACCCGGG TAATTCAGAG AGTTGGTCGT ATCAACAGAA TCAGCAAGCG AGTATTCAAG 
AACCTGTATA TTTATAACTT TTTCCCCACA CTTCAAGGGG CAACTTACGT TAAGAGCCGC 
GAGATAGCTA CCGAAAAAAT GTTCTTGATT CACAACACGC TGGGAGAGGA TGCCAAGATA 
TTTGAGCCTG ACGAGGAACC ATCTGCCTCA CAGCTTTTCA AGCGAATTAT GGAGAACCCC 
GATAACATGG AAGAGGAGAG CTTCCAGACA AAAATCAGGC AGCTTTATGC TGATATTGTT 
GTTTCATCGC CGGAGGTTAT CAAGAGAATA AGCGAATTAC CGCCTCGGAT AAAAGTGGCC 
AAGAACTTTA ACGAGAATAA CCTGGTTCTA TTTATTAAGA AGGGGCTAGG ACTTTTCACT 
AGGGGCATTC TTAGCGATGA TAAAAAACCA CAAGACCTTG TTTTTGAAAA TACGTTAGAA 
CTTATCGAAT GTAAAAAAGA GGAAAAGGCT ATTCCTTTTA GTGACTCATT CTGGGACAGC 
TATTACAATG TTAAAGAATT CAAGGAAACT TCCGGTCCCC CTTCCAGCGA GATAAGTATC 
GAGAAGAAAG CCCTGAACAA TGTCAATACT TTATTGCAGG GCAAAATACC GGAATTGGAA 
AGTTACTTGC CGTTCTTGAG AGAACTCCGG GAAGATATCC TGGAATACAA GACGCTTTCT 
GACTATACGT TGAGAAGGAT TGCAAACTTG AATTCGCTGA ATAAAGACAA TGCGAAGATA 
CAAAAGACGA AAGACGAACT AGAAAAGCTT CAGCAAGAGC TCGGGGCTGA TTATCTGGAT 
AAAGTAAAAT CCAAGTTGGG ACAACTGCAA ACAGAAGTCA TCATAGCTAT TGAAAACGTC 
AAGGAATAG 

 

Protein sequence

MSTDTTFITN EGNKKLKDRI AELIAHSKEL KFLVGFFYFS GIRELYTSLK NNPNIQLDVL 
VGLNVDKTVH GLTEYGDTTK GLTDKEKFEQ FLGSISKSIN SDDFDNQVFY DQARFFLEAI 
KQDKLRIRKT YDPNHAKLYI FKLKDELATI KKAFFITGSS NLTKAGLSHQ NEFNVEISDY 
GAKEAEDYFD ELWEEAVKVT EIASFKDRLI NLLEKKTLLT EVTPYEAFAL VLKTYIELQE 
QKQIKQSLVD LLKKKGYRAY KYQTDAVAQA ISILDQYKGV IVADVVGLGK SIIAGLIAKS 
LGKRGIILCP PGLIGDDNAA SGWRKYREDF ALHDWEIRSS GLENLKKALD LVRSNPEYEV 
VIIDEVHRFR NQDTEAYEVL SNICRDKLVI MLTATPFNNT PADILSLLKL FIVPGKSNIT 
LANDLTARFR SYTQTFRRLS NIRKNCNSPS LPKRNQAIAD YEVMFGANKI DLNNVRDRTR 
YLSKSIRNVI SQVTIRRNRI DLRKDPEYSK EIYELSDVQD PCEIFYELTP EQSEFYDRVL 
QDYFGERGQF TGAIYQPFLY ETGQLEPDEE TLNQAENRES LIQRNLYDFM RRLLVKRFES 
SFGSFRQSII NFKSVTEKVQ TFIENSNGKY ILDRPLLEKI YEADIDEIEE ELAGFEQRIS 
EGTFPKTEKV YKVNDFISKD KFNTDIQSDI DLFDQILDEL DSLKLVNKDP KLKKLATEVK 
NILKKKDNPE EPERKIVIFT EYIDTARYLE AYLEKEFPSC CITVKGDLNK TKSDEVLRNF 
DTTHKKPEDS YKILITTDKM SEGFNLNRAG AVINYDIPWN PTRVIQRVGR INRISKRVFK 
NLYIYNFFPT LQGATYVKSR EIATEKMFLI HNTLGEDAKI FEPDEEPSAS QLFKRIMENP 
DNMEEESFQT KIRQLYADIV VSSPEVIKRI SELPPRIKVA KNFNENNLVL FIKKGLGLFT 
RGILSDDKKP QDLVFENTLE LIECKKEEKA IPFSDSFWDS YYNVKEFKET SGPPSSEISI 
EKKALNNVNT LLQGKIPELE SYLPFLRELR EDILEYKTLS DYTLRRIANL NSLNKDNAKI 
QKTKDELEKL QQELGADYLD KVKSKLGQLQ TEVIIAIENV KE