| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0170 |
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| Symbol | |
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| ID | 5131493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 171591 |
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| End bp | 172550 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640529073 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_001213639 |
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| Protein GI | 147668821 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3316] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0337001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAG GAATTTTACC AATAGAATGC AAATATTGCG GTTCAAGGCA TACCCGCCGT
TATGGGCATA GCAGAGCTCA AAAACAACGT TGGTTGTGTA ACGACTGTTG CCATACCTTC
GTGGAAACAA GTGCCCAGCC GGGCATGAGA ACACCGCCTG AACAAATCGG GGCGGCAGTC
TCCATGTTTT ATGAAGGCTT GAGTTTAAGT GCTATATGCC GTCAAATGAA ACAGATACAT
AATATAAGCC CTTCAGACGG CACAGTCTAC GGCTGGATTA CAAAGTACTC CAAAGAAGCT
ATTGCCAGAG CTAAAGATAT TAAGCCAAAA GTAGGTGATG TCTGGCTATG TGATGAAACA
GTCCTGAAGA TAGCAGGCAA GAACATCTGG TTTTATGACA TCATAGACAT GAAAACCCGT
TTTCTGCTGG CTTCCCATCT TTCAGACAAG CGTTATCTGG GAGATGCCCG CACTGTACTA
CATAGAGCTG GTATTAAGGC AGGTAAGAGT CCTAAGGTAG TTATCACAGA CAGCCTTAAC
AGCTATCCTC AAGCCATAGG TGATGTATTC GGGGCTGATG TAAGGCATAT CAAGTACAAG
GGAATAACCA AATCCCCCAA CAATAACATC TTGGAACGCT TTCATGGCAC GCTCAAAGCC
CGCACAAAGG TAATGCGAGG CTTAAAAAGC ATGGAGACTG CCAGACTATT TACTGACGGC
TGGCTGGTTT TCTACAACTT CATGCGTCCT CATGAGTCTC TGGATAATCA GACACCTGCC
CATAGAGCTA AGGTTCAATT GCTAAATCAG ACGTGGCATG AAGTAGTCAA GACCTCTGAG
TTTAAGGCTG AGCCAGTGAA ATGGCTAGAG AAGCCACCTT CGTTTTTGAA GCAGTCAATT
CCCTCAAGCG TAAAGCGAGC TATCGGGCTG GGTAATAAAC TTCCGAGAGG ACTCAGATGA
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| Protein sequence | MMKGILPIEC KYCGSRHTRR YGHSRAQKQR WLCNDCCHTF VETSAQPGMR TPPEQIGAAV
SMFYEGLSLS AICRQMKQIH NISPSDGTVY GWITKYSKEA IARAKDIKPK VGDVWLCDET
VLKIAGKNIW FYDIIDMKTR FLLASHLSDK RYLGDARTVL HRAGIKAGKS PKVVITDSLN
SYPQAIGDVF GADVRHIKYK GITKSPNNNI LERFHGTLKA RTKVMRGLKS METARLFTDG
WLVFYNFMRP HESLDNQTPA HRAKVQLLNQ TWHEVVKTSE FKAEPVKWLE KPPSFLKQSI
PSSVKRAIGL GNKLPRGLR
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