| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0165 |
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| Symbol | |
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| ID | 5131575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 162990 |
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| End bp | 165971 |
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| Gene Length | 2982 bp |
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| Protein Length | 993 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640529068 |
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| Product | formate dehydrogenase alpha subunit |
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| Protein accession | YP_001213634 |
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| Protein GI | 147668816 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.410725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTCTC AGTTTAGTAG GCGAGATTTC CTCAAGATCA GCGGAGGGAC CGCGGGTCTC
TTTGCCACAG CTGGTCTTTT CCGTGGACCC ATTAAGGGTG TTGAGCCCAA AATGGTTGAC
ACGCGCCCCC GGTGGGTAAA AGAAACCACC ACCATTTGTC CCTTTGATGC CAGCGGTTGC
GGATTTATCT GCTATACCGA TTCGGCCGGC AACCTCACCA ATATGGAAGG TGATCCAGAC
AATCCCGTAA ATCGGGGGAG TGCCTGTTCC AAGGGTGCTT CACTGATTCA ACTTCACAAT
AATAAACACC GTTTAGAAAA GGTGCTTTAC CGCGCCGCCG GTGCGAATGA TTGGGAAGAA
AAGTCATGGG ATTGGGCGTT TGGTGAAATT GCCAAAAAGG TAAAGGCCAG CCGTGACAGC
GGTTTTGTAG CTAAAAATGC TGCCGGCAAG ACCGTAAACC GCACCGAGGC TATTGCCTCG
CTGGGCGGAG CTACTCTGGA CAACGAAGAA TGTTATCTTC TGTCCAAGAT GCTTCGTGCC
CTGGGCATTG TCTACCTGGA TAGCCAGGCC AGACTGAGCA CCGCTTCCAG CCTGGAAGCT
TTGGCAGCTT CGTTCGGACG AAACGCCATG ACCAACAGCT GGACCGATGT TTCAAACGCC
AACGTCATTC TGGATATGGG TGGCAACCCA GCTGAAAACT ACCCTGCCTG TTTCTCCCAT
CTGGGCGAAG CTATGGGCAA AGGTGCAGAG CTTATCAGCG TTGACTGCCG CCTGACCCGG
ACTGCCGCCA AGGCCGGCAC ATTCGTTGCC GCCCGCTCCG GTTCGGAGAT TGCCTTTATC
GGCGGGCTTA TCAAATATGT CATTTCTGAC ATTGAAGCTC ACCCCGCAAA TTACAACCTG
ACCTATATTA CCGAATACAC CACTGCCAGC ATGGTAGTAA ACTCCAACTT CAAGGGTCCG
GCTGATTTGG ACGGCATGTT TGTAGGTTAC AACACCGCCA GCCATTCATA CGACCAATCA
AACTGGAACT TTACCAAGGC CAGCAACGGC GAACCGGTAA TAGACAAAAC CCTTACCAAC
CCCAATTGTG TCTTCCAGCT TTTGAAGAAG CAATATGCCC GTTACACTCC GGAAATGGTG
TCCGCAACCT GTGGCTGCTC TCAGGCTGAC TTCGCAAAGG TCTGTGCCTC TTTTGCCGCA
ACCGGCAAAG CAGACAAGGC CGGCGCTATT GTCTACGCCA TGAGCTCCAC CCAGCACACC
TCCGGCGCTC AGACAGTTCG GGCTTATGCC GTACTTCAGA TGCTGCTGGC CAATATCGGC
GTATCCGGCG GCGGTTTATT CGCCCTTGGA GGTGAATCTA ACGTACAGGG TGCTGCCGAC
AACGGTGTCT CATGGAACAA ACTGCCCGGT TATTTATCTG CCCCCAACGA AGACGATACC
ACTTTTGCCG CCTATGCTTC TAAAGCCGGC GACCAAAGTG CAGCCAGCCT TTTGAAGGCC
TGGTACGGCT CTAATGCCTC CAGCTCAAAC GGCTTCGGCT TCGGCTTCCT GCCCAAAACA
GATAATAATA CCAATTACTC TTACATAAAC GCTATCAAAC AGATGGCTGC CGGCAAAATA
AAGGGCGCTT TCGCCTGGGG TGCAAACCCG GTGGTTGAGA GTGCTGCTGC CGGTCAGGCT
ACTCAGGCTT TGGCCAAACT GGACTGGCTG GTAGTGACAG ATATGTTTGA GTCTGAAACT
GCTGCTTTCT GGAAGAAAGA CGGGGTGACT TCGCAGACCG AAGTCTTCCT GCTGCCCACT
GCCTGTTCTT ACGAAAAAGA AGGCAGTGTA ACCAATGCTG ACCGCTGGAT TCAATGGCGA
AACAAGGCCG TCAGCGCTTC CGGTGAAGCC AAATCTGAGC TTGAGGTTAT CAGCTCCCTG
CTTAGCCGCC TTCAGACCCT TTATCAGGGC GAAAGCGGCC TCAATGCAGA AGCTATTACC
AAACTCAGCT GGACTTACAG CACCAACCCC TCTGCGGCTG ATGTAGCCAA AGAGATGAAC
GGATACAAGA TATCTTCCCT GCAGCAGCTT GAAAGTCCTG AAGACCTAAG GGCTGACGGA
ACAGTTGCCT GCGGCAATAG CCTTTATATC GGCAGCTTTA CAAATGCCGG AAACCAAATG
GCACGGCGTG AACAGACCGG TGCTTTCCAT GCCGGTTGGG CTTGGAGCTG GCCGATGAAT
ACCCGCATAA TGAACAACCG CGCTTCAGTT GACCTCAGCG GCAAGCCCTT CAATGCGGCC
AAACCCGTTA TCAGCTGGAA CGGCATTAGC TGGACCGGTG ACAATGTTGA CGGTAAAAAC
GCTCCGTTTA ATCAGAGCGG CGGACTGCCC TTTAAAGGTA CCAATGGCAA TACCGCACAG
CTCTTTGCCG CCATGGCTGA CGGCCCCATG CCTGAACATT ACGAACCTTG GGAAAGCCCG
GTGGACAATG CTCTGTCCGG CACCCAGAAT AATCCGACCG CTATGGTCTT CGAGGGCGAT
ACCCAGGGCA GTGCCGGTGA ATATCCGGTT ATCTGTACCA CTATACGCAC CGTTGAGCAT
AGCTTGGGCG GCCAGTTAAC CCGCAATATG CCTTTCCTGG TAGAACTTGC CCCGGCTGCT
TATGTGGAAA TCTCCGAACA GCTGGCCAGC GAAAAGGGTA TCAAGGCCGG TGATATTGTA
AAACTCACTT CGGCCAGAGG CAGCGTATCA GTGGCTGCAG CCGTTACCAA ACGGCTTAAA
CCCTTCAGCA TTGGCGGCAA AACTGTTCAC CAGGTAGCCA TACCCAATCA CTGGGGCTTT
ATGGGAATTG CACAGGGTGA CAGTGCCAAC GTACTTGCCC CGAACACCGC AGACTCCAAT
TCCTCCACTC CTGAGTTCAA GGCGTTCTTG GTCAAGGTTG AAAAAGCAGC CGACGGTACC
GTACCCACCA TCACCGGACG CTATAAGGTA CTTGAGGACT AA
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| Protein sequence | MRSQFSRRDF LKISGGTAGL FATAGLFRGP IKGVEPKMVD TRPRWVKETT TICPFDASGC
GFICYTDSAG NLTNMEGDPD NPVNRGSACS KGASLIQLHN NKHRLEKVLY RAAGANDWEE
KSWDWAFGEI AKKVKASRDS GFVAKNAAGK TVNRTEAIAS LGGATLDNEE CYLLSKMLRA
LGIVYLDSQA RLSTASSLEA LAASFGRNAM TNSWTDVSNA NVILDMGGNP AENYPACFSH
LGEAMGKGAE LISVDCRLTR TAAKAGTFVA ARSGSEIAFI GGLIKYVISD IEAHPANYNL
TYITEYTTAS MVVNSNFKGP ADLDGMFVGY NTASHSYDQS NWNFTKASNG EPVIDKTLTN
PNCVFQLLKK QYARYTPEMV SATCGCSQAD FAKVCASFAA TGKADKAGAI VYAMSSTQHT
SGAQTVRAYA VLQMLLANIG VSGGGLFALG GESNVQGAAD NGVSWNKLPG YLSAPNEDDT
TFAAYASKAG DQSAASLLKA WYGSNASSSN GFGFGFLPKT DNNTNYSYIN AIKQMAAGKI
KGAFAWGANP VVESAAAGQA TQALAKLDWL VVTDMFESET AAFWKKDGVT SQTEVFLLPT
ACSYEKEGSV TNADRWIQWR NKAVSASGEA KSELEVISSL LSRLQTLYQG ESGLNAEAIT
KLSWTYSTNP SAADVAKEMN GYKISSLQQL ESPEDLRADG TVACGNSLYI GSFTNAGNQM
ARREQTGAFH AGWAWSWPMN TRIMNNRASV DLSGKPFNAA KPVISWNGIS WTGDNVDGKN
APFNQSGGLP FKGTNGNTAQ LFAAMADGPM PEHYEPWESP VDNALSGTQN NPTAMVFEGD
TQGSAGEYPV ICTTIRTVEH SLGGQLTRNM PFLVELAPAA YVEISEQLAS EKGIKAGDIV
KLTSARGSVS VAAAVTKRLK PFSIGGKTVH QVAIPNHWGF MGIAQGDSAN VLAPNTADSN
SSTPEFKAFL VKVEKAADGT VPTITGRYKV LED
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