Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0104 |
Symbol | |
ID | 5131704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 103582 |
End bp | 105129 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640529007 |
Product | reductive dehalogenase |
Protein accession | YP_001213573 |
Protein GI | 147668755 |
COG category | [C] Energy production and conversion |
COG ID | [COG1600] Uncharacterized Fe-S protein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR02486] reductive dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCAT TTCATTCCAC CCTTAGCCGC CGTGACTTTA TGAAGGCTGT CGGTTTGGCT GGAGCAGGCA TTGGTGCAGC TTCCGCCGCA TCACCGGTAT TTCATGACCT GGACGAAGCG TCCCAAATCG GAGGGGTTGC AGAGAAACGC CCCTGGTATG TACGTGAGTT GGAATATGCT AAGCCCACTG TTGAAATAGA CTGGAATATG ATTCAGCGGC AAACCCATTA TAACAACTGG GAAGACCATC TGGATCAAAC CGAAAAAGAT AACCGGGCTC ACATGTATTA TGACAATACC AAAAAGATGG TCTTGGAAAA CAATCCGGGT AATACTATGT TTGATGTAGC CATACGGCAC CCGGCATGGA CTGCCGTCCG AAGAAATATG GACTATTTTT TCGGAGTTGA AGGCATCATG AAAGATACTC CTCCCGGTTT TGAAATGGGT TTTGACCCCG AATCCGGGCA TTGTATGATG AGCCCTGTTT GGGCTACTGA TCTTTTCGGT ATTATCACTC CGGGGAATAT GGGAGTACCC CGTTGGGAAG GTACACCAGA ACAAAATGCT GCCCTTATCC GCATGGCGGC CAGGTGGTGT GGCGGGGCTG AAGTCGGTTA TTTGAAAGCA GATGAATATA CCAAGAAACT GGTGCATAAA ACCTGCGGTA TATTGCCTAT TCTGGCAGAC AAAAACGGGC GGGAAGTGGT TTGGGAAAAT GTTGACCAAC CATACGAGAC AGACAAGAAA CTGGTTATTC CGGAAAAATG TGACAACATA ATAGTGGTAA CGATACGTGA GGAGAGAAAT CCGGCCTTGA TGGCTCCCAG CTATAGAGCA GATGCCACTA CCGCCAAATC TTATGCCCGC TCAATTGCGT TTGATATTCA TTTCAGGGGC TTCCTGCATG CAATCGGTTA TACTTCCGCT GGTTCAGGTT GGGGACCTTG GAATAATGTC CCGTTCGGGG TACTTTCGGG CATCGGTGAA CTAGGGCGTA TGAGGGGACA GATAACACCA AGTTGTGGCC CATTGATTCG TAAAGTCGAA GTATTTTTTA CCGATCTGCC CTTGCCTCCG ACTAATCCAA TTGATTTCGG GGCAAACCGC TTCTGTAGAG ACTGCGGTTT GTGTGCCAAG GCTTGTCCTG CATCAGCTAT TCCAACTTTT AGAGAGCCTA CCTATGATAT TACCCCCGCA GATGATGCTA ATTCCAATCC CACCAAGCTT CATCCTGAAT ATTTTAACCT GTCCGGTAAA AAGGTTTGGC CCAACAATGA CTTTGCCTGT CACAATTTCT GGGTAACATC CGGTAAACAT GGTTGCGCTG CCTGTGTAGC TTCCTGCGTG TTCAGTAAGG ATATCAAATC CAGTATCCAT GAAGTTGTTA AGGGTGTTGT TTCTCAAACT GGAATGTTCA ACGGTTTCTT TGCAAATATG GATCATGCCT TTGGATATGG CATCGTTTCT GACCAGGATA TGTGGAATAA TTTCTGGTTT GAACCGGATA AATATTGGCC GCTCGAAGGT ATTGATACCA ATTTATAA
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Protein sequence | MSAFHSTLSR RDFMKAVGLA GAGIGAASAA SPVFHDLDEA SQIGGVAEKR PWYVRELEYA KPTVEIDWNM IQRQTHYNNW EDHLDQTEKD NRAHMYYDNT KKMVLENNPG NTMFDVAIRH PAWTAVRRNM DYFFGVEGIM KDTPPGFEMG FDPESGHCMM SPVWATDLFG IITPGNMGVP RWEGTPEQNA ALIRMAARWC GGAEVGYLKA DEYTKKLVHK TCGILPILAD KNGREVVWEN VDQPYETDKK LVIPEKCDNI IVVTIREERN PALMAPSYRA DATTAKSYAR SIAFDIHFRG FLHAIGYTSA GSGWGPWNNV PFGVLSGIGE LGRMRGQITP SCGPLIRKVE VFFTDLPLPP TNPIDFGANR FCRDCGLCAK ACPASAIPTF REPTYDITPA DDANSNPTKL HPEYFNLSGK KVWPNNDFAC HNFWVTSGKH GCAACVASCV FSKDIKSSIH EVVKGVVSQT GMFNGFFANM DHAFGYGIVS DQDMWNNFWF EPDKYWPLEG IDTNL
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