| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0078 |
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| Symbol | |
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| ID | 5131832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 82056 |
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| End bp | 83015 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640528982 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001213548 |
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| Protein GI | 147668730 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTCTT ACCATTTAAC TACATCGGGT TCTCACGAAC AGCCCCAAGC TAAAACCTAC
CATTTAACTA ATTTCAAAAA CCTTTCCGGA AGGCTGAATG CCTTTGTCCT GACATGCAAA
GTTGCCCGTC TTTCACCCCA TACCATCCGC TACTATACCT ATGCCCTTAA CTCATTCCTG
GGTTATTGCC AAACATTGGG TATCAATACA GTTGAGGAAA TAGAAGCAAA CCACGTCAGA
CTTTACTTAG TCAAATTACA GGAACGCAAT AACCCTACCT CAGTACTTGA TTACTACAAG
GCTGTAAAAC GCTTCTTTAA CTGGCTCATT GAGGAAGGCG TGCTTTCAAA AAGCCCGCTG
GCAACTATCA AACCGCCCCG AACCGAGCAA AAGATAATCC GGCCATTTAC CCGGCAGCAG
ATAGAAGATT TGCTTGCTAC TTGTGGAGAC AGTCCCATCG GGTTAAGAAA TAAAGCCATG
ATACTAACCA TGCTGGATAC CGGACTCCGA GTATCTGAAA TGTCGGCTAT TCAGTTAAAA
GACGTAGACT TTGACAAAGA AACCATAATA GTAATGGGCA AAGGTGCCAA GCAAAGAGTA
GTCCGTATTG GACATAAGGC CCAAGAAACC ATTCTGCGTT ACCTTCTCAC CCGTCAGGAT
GAATGCCCGG CACTCTGGAT GTCAACTACC GGATCAGGAC TTTCAACCGA AGGAATTAAG
GTAGTAGTAC GTGAACTTGG CAAAAGAGCC GGTCTAACCG GTGTCAGGTG TAGTCCGCAT
ACCTTCAGGC ATACCTTTGC TACTCAGGCG CTTATAAACG GGGCAGGGGA GTTTGAAGTA
CAATCTCTAC TTGGACACAG CACTTTGGTT ATGACTAAGC GCTATACAGC CAGCTTGAAG
AGTGAACATG CAGTCCAGGA ACATAAGAAA TTTAGCCCGG TGGATAATAT GAGGCTGTAA
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| Protein sequence | MLSYHLTTSG SHEQPQAKTY HLTNFKNLSG RLNAFVLTCK VARLSPHTIR YYTYALNSFL
GYCQTLGINT VEEIEANHVR LYLVKLQERN NPTSVLDYYK AVKRFFNWLI EEGVLSKSPL
ATIKPPRTEQ KIIRPFTRQQ IEDLLATCGD SPIGLRNKAM ILTMLDTGLR VSEMSAIQLK
DVDFDKETII VMGKGAKQRV VRIGHKAQET ILRYLLTRQD ECPALWMSTT GSGLSTEGIK
VVVRELGKRA GLTGVRCSPH TFRHTFATQA LINGAGEFEV QSLLGHSTLV MTKRYTASLK
SEHAVQEHKK FSPVDNMRL
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