| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0052 |
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| Symbol | |
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| ID | 5131818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 53418 |
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| End bp | 54812 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640528955 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_001213522 |
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| Protein GI | 147668704 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.980062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAA GCCGTAATGT TTATATCTGT TCCAACTGCG GACATGAGAG CCTGAAGTGG
CTGGGGCGTT GCCCCGGCTG TCAGGAATGG AATACTCTTG AAGAAACAAC AATTGCTGCA
CCTCTCGGGC GTAAAAATGC ACCTGCCCGG GTTATCAGCC CGGCAGCCGA GCTTTCCAGT
CTGAATGCAT CAGATACTAC CCGCCGGAGT CTATCTATTT CAGAGTTCAA CCGGGTTTTG
GGCGGTGGAA TAGTACCGGG TTCACTGATG CTTTTAGGTG GTGAACCGGG TATCGGCAAA
TCCACGCTCC TTCTTCAGGT GGCTGCCTCG GTAGCCCAGA GCGGCGGCAA AGTGGTATAT
GTTTCCGGGG AAGAGAACCC CGCCCAGATA AAAATGCGCG CTCAGCGTCT GGGTATCAGC
GGCGAGGGGC TTTTCCTTAT GGCTGAGACA GACCTTAATG CCATTCTAGC CCAGCTTTCA
GTCCTCTGCC CGTCATTGGT TGTTATAGAC TCTATCCAGA CTGTATTCTT GCCTGAGCTT
GAGGCCGCAC CCGGTGCTAT AAATCAGGTG CGTGAATCAG CCCTCCGCCT GATGCAGTGG
GCTAAGAGCA GCGGTGCCAG CGTATTTATC ACCGCCCATG TTACCAAAGA GGGCAACATC
GCCGGGCCGC GCATACTGGA ACACATAGTA GATGTGGTCA TGTACTTTGA GGGCGAGTCC
CAGAGTGCTT ACCGTTTGAT ACGTTCGGTC AAAAACCGCT TCGGTTCTAC CAACGAAGTA
GGCATATTTG AAATGAAAAG TGAAGGATTG GTGGAAGTAG CCAATCCCTC GCAGATATTT
TTATCTAATC GGCAGGCAAA CACTGTTGGT TCAGCTGTAA CAGCAGTGCT GGAGGGTAGC
CGCCCTTTAC TGGTAGAGGT GCAGGCACTC ACCAATACCA CCAGTTTCGG CCAGCCGCGC
CGCACGGCCA ACGGGGTAGA TTTTAACCGT ACTATTATGA TAGCCGCTGT TCTTTCCAAA
CGCCTTTCCA TGCGGCTGGG TACCCAGGAC ATAATAGTAA ATGCCACCGG CGGTATTCGT
CTGGACGAGC CGGCCGCAGA TTTGGCTATT GCTTTGGCCA TTGCCTCCAG TTACCGTGAT
ATCGGGGTCT GCCCGGAAAC CATAGCACTG GGTGAGATTG GCCTTTCAGG GGAACTGAGG
ACAATCCCTC ATTTGGAAAG ACGTCTTTCC GAGGCCAGCC GTTTGGGTTT TACGAGGGCT
TTGGTACCTG CCGGTGCTAA TTGCCAGAAT ATAAATATAA ATGGTATCCA GATTATTGCG
GTTTCAACTG TCAAAGAGGC TATTAAACTG GCGCTTACCG GGGTAAAAAC GGAGACCGAA
GATGTTTTTG AATGA
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| Protein sequence | MDKSRNVYIC SNCGHESLKW LGRCPGCQEW NTLEETTIAA PLGRKNAPAR VISPAAELSS
LNASDTTRRS LSISEFNRVL GGGIVPGSLM LLGGEPGIGK STLLLQVAAS VAQSGGKVVY
VSGEENPAQI KMRAQRLGIS GEGLFLMAET DLNAILAQLS VLCPSLVVID SIQTVFLPEL
EAAPGAINQV RESALRLMQW AKSSGASVFI TAHVTKEGNI AGPRILEHIV DVVMYFEGES
QSAYRLIRSV KNRFGSTNEV GIFEMKSEGL VEVANPSQIF LSNRQANTVG SAVTAVLEGS
RPLLVEVQAL TNTTSFGQPR RTANGVDFNR TIMIAAVLSK RLSMRLGTQD IIVNATGGIR
LDEPAADLAI ALAIASSYRD IGVCPETIAL GEIGLSGELR TIPHLERRLS EASRLGFTRA
LVPAGANCQN ININGIQIIA VSTVKEAIKL ALTGVKTETE DVFE
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