| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0049 |
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| Symbol | tgt |
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| ID | 5131803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 44470 |
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| End bp | 45648 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640528950 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001213519 |
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| Protein GI | 147668701 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0707792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATAAAT CTTTCATATT AAACAAAACC AGTTCCCGAA GTTTGGCCCG CCGCGGTCAG
CTTTTTACGG CCCATGGCAA AGTTGAAACA CCTGTTTTCT GCCCGGTCGG CAGTCAGGCT
ACGGTTAAAA CCCTTACCCC CGAAGACCTA AAATCCGTAA ATATAAATAT GATACTCTCC
AACACCTATC ACCTGTACCT TCGCCCCGGC ATACCTATCA TCAAAGAGAT GGGTGGCCTG
CACAAATTTA TGAACTGGGA CGGGGTTATC CTGACTGATA GCGGTGGATA CCAGATATTT
TCGCTGGCCA ATTTGCGCAA GCTGGATGAG GGCGGGGTTA GTTTCCGTTC CCATATAGAC
GGCAGTACCC GCTATATTAC CCCTGAAGAT GCGGTCAGCT TCCAGCAGGA CCTGGGGTCT
GATATTGCCA TGGTGCTGGA TGAATGCCCC CATTCCGAAG CCTCTGAGAA TGAGGTTTTG
GCGGCTATGG AACGCACCCA TCAGTGGGCA AAACGCTGTC TTGCTGCCCA TACCCTAAAA
AGCCAGCACC TTTTTGCTAT TGTTCAGGGC GGGCTTTCCC CCGAGCTGAG GCGGCAGTCA
GCCGAGTATC TGGCTTCACT GGATTTCCCC GGTTATGCGC TGGGCGGACT TTCACTGGGT
GAACCAAAGG ATATTACATT TGAAACCGTC CGCCATACCC TGCGTTTTCT GCCCGAAAAC
AAGCCCCGCT ACCTGATGGG AGTGGGTGCG CCCGAAGACC TGCTGGAAGG GGTAAGCTGC
GGGGTGGATA TATTTGACTG CGTATTGCCA ACCAGAGTGG CCCGCAACGG GGCTTTTTTC
AGCCGCTTGG GCAGGCTTAA TATCCGCAAT GCCGCTTTTG CCACTCAGAA AGGGCCTATT
GACCCGGATT GTAACTGCTA TACCTGCCGC AACTATTCAG CGGCCTACCT GCACCACCTG
TTCCGATGTG AAGAAATACT GGCCTACCGG CTGGCTACCA TACATAATAT AGCCTTCCTG
AGCAACCTTA TGCAGGAAAT ACGCACCTCC ATAGAAAAAG ACTGTTTTGA AGAATTTAAA
GCAGATTTTC TGTCCCGCTA CCAGCCTACC AATGAAGCTA TCCGTATTGA GCAGAAACAG
AAGTGGCTCT TTGGCAGGAA TGGTGAACCC CCCTCCTAG
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| Protein sequence | MDKSFILNKT SSRSLARRGQ LFTAHGKVET PVFCPVGSQA TVKTLTPEDL KSVNINMILS
NTYHLYLRPG IPIIKEMGGL HKFMNWDGVI LTDSGGYQIF SLANLRKLDE GGVSFRSHID
GSTRYITPED AVSFQQDLGS DIAMVLDECP HSEASENEVL AAMERTHQWA KRCLAAHTLK
SQHLFAIVQG GLSPELRRQS AEYLASLDFP GYALGGLSLG EPKDITFETV RHTLRFLPEN
KPRYLMGVGA PEDLLEGVSC GVDIFDCVLP TRVARNGAFF SRLGRLNIRN AAFATQKGPI
DPDCNCYTCR NYSAAYLHHL FRCEEILAYR LATIHNIAFL SNLMQEIRTS IEKDCFEEFK
ADFLSRYQPT NEAIRIEQKQ KWLFGRNGEP PS
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