| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0047 |
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| Symbol | alaS |
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| ID | 5131843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 41385 |
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| End bp | 44000 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640528948 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001213517 |
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| Protein GI | 147668699 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.620417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTAGCA GTGATGAATT ACGCGAAAAT TATCTGAAAT TTTTTGAGGA GAAGGGGCAT
AAGCGGATTG CCAGTTCTTC CCTGATACCC CACAATGACC CCACCCTTCT TTTAACTACC
GCCGGCATGG TGCAGTTCAA GCCCTATTAT CTGGGTGTGG CCAAGCCTGA AAATCCGCGT
ATGGCCTCCT GCCAAAAATG TTTCCGCACT ACCGATATTG AATCCGTGGG CGACGCCAGC
CACCTGACCA TGTTTGAAAT GCTGGGCAAC TTCAGCATCG GCAACTACTT TAAAAAAGAA
GCTATTGCCT GGGCTTGGGA GTATGTAACC CAAAGGCTAA ATATACCTGC CGAAAGGCTC
TGGATAACAG TCTATCTGGA TGATGACGAG GCTATTGCCC TCTGGAAGGA ACAGGGAGTA
CCCGAAAACC GGATAGTCCG GCTGGGTGCG GCTGACAACT TCTGGGGACC GGCCGGGGAT
TCAGGTCCCT GCGGCCCTTG CAGTGAAATC CACTATGATT TCGGGCAGGA AACGGGCTGC
GGCAAGGCGG ATTGCAACCC CTCCTGCAAG TGCGGCCGTT TCTGTGAAAT ATGGAATCTG
GTATTTGTCC AGTTTAATCA GGACAAGAGC GGCAAGCGTC AAAATCTGCC TGCCCCCAGC
ATTGATACCG GCATGGGGCT GGAACGCCTG ACTATACTGA TGCAGTCCAA GAAAAACGTA
TACGAAACCG ATATATTTGC CCCAATTGTG GAAAAAGCCT GCCTGCTTTC GGGCAGGAAA
TACGGGTGTG ATGCCGCAAC TGACAGAGCC CTGCGGATAG TATCCGAACA CAGCCGGGGC
ATTACCTTTC TGATTGCTGA CGGGGTTATT CCGGACAAGG CGGGGCGGGG CTATGTGCTT
CGCCGTCTGC TTCGGCGGGC AGTCCTTTTC GGGCGCAGGC TGGGATTGGA AAGGCCCTTC
TTGGTGGATA TGGCCGGGGC GGTTATTAAC CGTATGAGCG GCATTTATCC TGAACTTAAA
AAACGGCAAA CCTATGTACT GGAGATGATA GCCAGTGAGG AAGCCCGTTT TTCGGAAACG
CTGGCTACCG GTCTGGAGCT TCTGGAAGAG ATAGTCCGCC AGACCAAAGG AGGGCGGATT
TCCGGGCAGG ATGCCTTTAA ACTGTACGAT ACTTACGGCT TTCCGGTGGA GATGACTACC
GAAATAGCCG CCGAAAAGGG CTTGAGTGTA GACCTTGATG GATTTGAATC CGAAATGGAA
ATCCAGCGTA CCAAAGCCCG TTCCAGCCGT AAGTTCAGCT TTGATGCGGC GGCTACCGCT
GAGGCAGTCA AGAATATGCG CCATGCCGAA AAAACCTGTT TTGTGGGATA CGAACTTGCC
ATTCAGAAAT CAACTATTAA AGATATTCTG ACCGAGGGCG GCACAGTTGA CAGTATAGAA
GAGGGTGACG AGGCCAGCAT AGTGCTGGAT GAAAGCCCTT TTTATGCCGA AATGGGCGGA
CAGGTGGGCG ATACCGGTGA GATTATAACC GATGCAGGGC GTTTTGAGGT TAAAAATACC
CTCCACCTGC CCAACGGGGT TTTTCTGCAT CAGGGGCGAG TGATAAATGG CTGCCTGAAG
ATATCTGAAG CGGCTACTGC CCATATAAAT GAAGAACGCC GGCGGGATAT TGCCCGCAAC
CATACCGCTA CCCATATACT CCAGACGGCT CTCAGGGAAG TGCTGGGTGA GCAGGTTCAG
CAGAGGGGTT CGGTGGTAAC GCCTGACCGC CTCCGATTTG ACTTTTCCCA TCTGAAACCC
ATGAGTAAAG ATGAAATGCG GCGGGTAGAG GAATTTGTGA ATGACAAAAT CCGCCGCAAT
CTGCCGGTTT ATGCCGAAGA AATGCCCTAC CGCCACGCTC TGGAGGAGGG TGTAACTGCC
CTTTTTGGGG AAAAATACGG TGACAGGGTA CGGGTGCTCA GGGTGGGGCG TCCAGCGGTT
TCAGCTGAAC TTTGCGGCGG TACCCATGTG ACCGCCAGCG GTGAAATAGC CTTGTTCAAG
ATAATGAGTG AAAGCAGTGT GGGGGCAGGT CTCCGGCGTA TTGAAGCTGT GACCGGGCGG
GAGGCTGAGG CTTTCATTAA TCTCCAGCAG GACAGTTTGT CCGAACTTTC GGGCATGCTG
GAATCTACTG CGGAAGAATC ACCACGCAAA CTGGCTGAAC TGAAAGAAGA AATAGACACG
CTTAAGAAAG CAGTCCAAAA TCTGGAACGC CAGATGTCTC GGGGTGAGGC GGAAGAGCTG
CTTTCCAAAG CTGAAGATTA CAAAGGGGTC AAACTGCTGG TCAGCCGTAT GACCTCGGTC
AATGCTGATA CCCTGCGTGA GACGGCTGAT TTTCTGCGGG ATAAGCTGGG CAGCGGGGTA
ATAGTGCTGG GTACGGTTAC CGAAGATAAG CCGTTCTTCC TGTGCATGGT AACCCCTGAT
CTGATTGCCA AAGGATATCA TGCGGGCAAT ATAGTCAAAA AACTTTCCCA GATAGCCGGC
GGCGGCGGTG GCGGCAAGCC GAATATGGCT CAGGGCGGCG GGCGTGACAA GTCCAAACTG
GACGAAGCTC TTCAGGCTGT AAAGGGAATG ATATAA
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| Protein sequence | MFSSDELREN YLKFFEEKGH KRIASSSLIP HNDPTLLLTT AGMVQFKPYY LGVAKPENPR
MASCQKCFRT TDIESVGDAS HLTMFEMLGN FSIGNYFKKE AIAWAWEYVT QRLNIPAERL
WITVYLDDDE AIALWKEQGV PENRIVRLGA ADNFWGPAGD SGPCGPCSEI HYDFGQETGC
GKADCNPSCK CGRFCEIWNL VFVQFNQDKS GKRQNLPAPS IDTGMGLERL TILMQSKKNV
YETDIFAPIV EKACLLSGRK YGCDAATDRA LRIVSEHSRG ITFLIADGVI PDKAGRGYVL
RRLLRRAVLF GRRLGLERPF LVDMAGAVIN RMSGIYPELK KRQTYVLEMI ASEEARFSET
LATGLELLEE IVRQTKGGRI SGQDAFKLYD TYGFPVEMTT EIAAEKGLSV DLDGFESEME
IQRTKARSSR KFSFDAAATA EAVKNMRHAE KTCFVGYELA IQKSTIKDIL TEGGTVDSIE
EGDEASIVLD ESPFYAEMGG QVGDTGEIIT DAGRFEVKNT LHLPNGVFLH QGRVINGCLK
ISEAATAHIN EERRRDIARN HTATHILQTA LREVLGEQVQ QRGSVVTPDR LRFDFSHLKP
MSKDEMRRVE EFVNDKIRRN LPVYAEEMPY RHALEEGVTA LFGEKYGDRV RVLRVGRPAV
SAELCGGTHV TASGEIALFK IMSESSVGAG LRRIEAVTGR EAEAFINLQQ DSLSELSGML
ESTAEESPRK LAELKEEIDT LKKAVQNLER QMSRGEAEEL LSKAEDYKGV KLLVSRMTSV
NADTLRETAD FLRDKLGSGV IVLGTVTEDK PFFLCMVTPD LIAKGYHAGN IVKKLSQIAG
GGGGGKPNMA QGGGRDKSKL DEALQAVKGM I
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