Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0046 |
Symbol | |
ID | 5131879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 40262 |
End bp | 41269 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640528947 |
Product | glucokinase |
Protein accession | YP_001213516 |
Protein GI | 147668698 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00210983 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACCGTA GTAATTCAGA GGTTATGAGC AAGCCCTGTT TGTGTCTGGA TATAGGCGGC AGTAAAATCC GTTCGGCGGT GGTCACCCAT GACGGACGGG TGGTGGCTTG GGAACAGGAG CCTACCTGTG CCCTCAACGG GGTAACGGGT GTATTTGAGA GCATCTGCCT GGTGCTTGAC CGCTTGCTTG AGCGTAACAA CCTGAATACC TCACAGTTTG AGGCACTTGC TGCGGCAGTT GCCGGGGGTA TAGATATGCC AAACGGGCTG GTTACCCAGT CTCCCCATTT GCCCGACTGG CGGGACGTGC CCCTCAGGGA TATGCTTACA GAACGTTATC TCAAGACCTT TATTATAAAT GATGCTTCGG CTGCGGCACT GGGTGAACAC CGTCTGGGAG TGGGGCTGGG AGTTAAAAAT CTGGTTTACC TGACCGTTTC CACCGGTATC GGGGGCGGTA TTATTATAAA TAACGAGCTG TATCTGGGGC AGAGCGGCTG TGCCGGTGAA ATAGGGCATA TGTGTCTGGA TATAAACGGC AAGGAAGATG TCTGCGGCAA CAAAGGCTGT TTGGAAACAC TGGCTTCGGG TACGGCTATT GTCAGCAGGG TTCAGACCGA ACTTGCTGGG GGTGAATTTT CCGTACTGGT AGAACGCTTC AAGGCGGATT ATTCGGCTTT GACCGCAGAG GATATAGGCA GGGCGGCTTC AGAGGGTGAC AGGCTGTGTC TGGGGATTAT CCGTCAGGCA GGGGAATATC TGGGAATCGG GCTGGTGAAT ATTGCCAATA TATTTAACCC GGAGCTTATT ATACTGGGGG GCGGGGTTTC CAAGCTGGGA GAGATATTTA TTGAGCCTGC CCGCCAAGTG CTTTATAAAC GGGCTTTCCG TCTGGCGGGG GATGATGTCC GCCTGATAGT TTCGGTTCTG GGGGATAATG CCGGGGTGAT TGGGGCAGCT CTGTATGCCT ATGCCTGTCT GGATAGTGCG AACAACCAGC CTCAGTGA
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Protein sequence | MNRSNSEVMS KPCLCLDIGG SKIRSAVVTH DGRVVAWEQE PTCALNGVTG VFESICLVLD RLLERNNLNT SQFEALAAAV AGGIDMPNGL VTQSPHLPDW RDVPLRDMLT ERYLKTFIIN DASAAALGEH RLGVGLGVKN LVYLTVSTGI GGGIIINNEL YLGQSGCAGE IGHMCLDING KEDVCGNKGC LETLASGTAI VSRVQTELAG GEFSVLVERF KADYSALTAE DIGRAASEGD RLCLGIIRQA GEYLGIGLVN IANIFNPELI ILGGGVSKLG EIFIEPARQV LYKRAFRLAG DDVRLIVSVL GDNAGVIGAA LYAYACLDSA NNQPQ
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