| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_5052 |
|---|
| Symbol | hisS |
|---|
| ID | 5094137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 6091653 |
|---|
| End bp | 6093080 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644744478 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | YP_001197370 |
|---|
| Protein GI | 146302779 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.504123 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCAA AACCAAGTAT ACCAAAAGGA ACAAGAGATT TTTCACCAGC AGAGGTGTCA
AAACGTCAAT ATATTATTCA GACTATAAAA GCTAATTTTG AAAAATTTGG TTTTCAGCCA
ATCGAAACGC CTTCGTTTGA AAATTCAGAT ACCTTAATGG GGAAATATGG AGAAGAAGGA
GATCGTCTGA TTTTTAAAAT TTTAAATTCA GGTAATTTTT TCTACAATAA AAGTAAAATC
GAATTGCCAG AATCGATCGA AGAATTACAG CTAAATTCTG CTGAAAAAAT AACTTTAGAG
CAAAGAATTG AGCTGAATAA ATTCACAGGG AAAATTTCTG AAAAAGCGTT GCGTTACGAT
TTAACAGTGC CGTTTGCAAG ATACGTTGTA CAACACCAAA GTGAAATCGA ATTTCCTTTT
AAAAGATACC AAATCCAACC GGTTTGGAGA GCAGATAATC CGCAAAAAGG TCGTTTTAGA
GAATTTTTTC AATGTGATGC TGATGTTGTA GGTTCAAAAT CTTTATGGCA GGAAGTAGAA
TTGGTTCAAT TGTACGATAC TGTTTTTACT TCTTTAGGTT TAGAAGGAGT TACTATTAAA
ATCAATAACC GAAAAATTTT ATCTGGAATT GCTGAGGTAA TTGGCGCTTC AGATAAATTA
ATCGACTTTA CAGTTGCCCT TGATAAATTA GACAAAATTG GTGAAGACGG CGTAAAGAAA
GAAATGATCG AAAAAGGAAT TTCTGAAGAT GCTTTAGTAA AAGTGCAGCC ACTTTTTAAT
TTCTCAGGAA CTTTTGCAGA CAAAATTGCA CAGCTTTCGG ACTTATTGTC TTCTTCTGAA
GAAGGAATGA AAGGAGTTGA AGAATTGAAG TTTATTTGTG ACAATGTTGC AGATTTAGGT
TTGTCTACTG CAGTTTTAGA TCTTGATGTG ACATTAGCTC GTGGTTTAAA TTATTATACC
GGAGCTATTT TTGAAGTTGC AGCGCCAAAA ACCGTTGCAA TGGGTTCTAT TGGCGGAGGC
GGAAGATACG ACGATTTGAC GGGTATTTTT GGTTTGAAAA ATATGAGCGG TGTTGGAATC
TCTTTTGGAT TGGATAGAAT TTATCTGGTT TTAGAAGAAT TGCAATTATT TCCTGAAACT
GTAGCTGCTA CTTCAAAAGC AATATTCTTG AATTTTGGAG ACAAAGAAGC TTTGTATGCT
TCAAAAGCCA TTCAGAAATT AAGACAGGAA AATATAAAAG TAGAGTTATA TCCGGATAAT
GTAAAAGTAG GTAAACAATT TCAATATGCA GATAAGCGTT TGATTCCGTT TGCTGTATTA
GTTGGAGATC AGGAAATTAA TTCAAATTCT TATGCGCTTA AAAATTTAGT GACAGGAGAA
CAGGTGTCTG TAGATTTTGA AGGATTGAAA AAAACTTTGT TAGGTTAA
|
|---|
| Protein sequence | MASKPSIPKG TRDFSPAEVS KRQYIIQTIK ANFEKFGFQP IETPSFENSD TLMGKYGEEG
DRLIFKILNS GNFFYNKSKI ELPESIEELQ LNSAEKITLE QRIELNKFTG KISEKALRYD
LTVPFARYVV QHQSEIEFPF KRYQIQPVWR ADNPQKGRFR EFFQCDADVV GSKSLWQEVE
LVQLYDTVFT SLGLEGVTIK INNRKILSGI AEVIGASDKL IDFTVALDKL DKIGEDGVKK
EMIEKGISED ALVKVQPLFN FSGTFADKIA QLSDLLSSSE EGMKGVEELK FICDNVADLG
LSTAVLDLDV TLARGLNYYT GAIFEVAAPK TVAMGSIGGG GRYDDLTGIF GLKNMSGVGI
SFGLDRIYLV LEELQLFPET VAATSKAIFL NFGDKEALYA SKAIQKLRQE NIKVELYPDN
VKVGKQFQYA DKRLIPFAVL VGDQEINSNS YALKNLVTGE QVSVDFEGLK KTLLG
|
|---|
| |