Gene Fjoh_5049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_5049 
Symbol 
ID5092193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp6088305 
End bp6089234 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content34% 
IMG OID644744474 
ProductABC transporter related 
Protein accessionYP_001197367 
Protein GI146302776 
COG category[R] General function prediction only 
COG ID[COG4152] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACT TACTAGAAGT ACATAAAGTC GTAAAACAAT ATGGCGATTA TGTAGCGCTT 
AACGAAGTTT CATTAAATGT GCCAAAAGGC AGTATATATG GACTTTTAGG TCCAAATGGA
GCTGGAAAAA CATCCCTTAT TCGAATCATA AATCAAATTA CACTTCCGGA TAGCGGTGAG
ATAATTTTAG ATGGAGAAAA ATTACAGCCA AAACACGTGC AGACAATTGG TTATCTGCCG
GAAGAAAGAG GTTTGTACAG TTCAATGAGA GTAGGGGAAC AATGTTTGTA TCTTGCTCAA
ATGAAAGGAC TTTCTAAAGC CGAAGCCAAA AAACAATTGG ATTATTGGTT TGATCGTTTA
GGAATTCAAG GCTGGTGGAA CAAAAAAATT CAGGAACTTT CTAAAGGAAT GGCGCAAAAA
ATTCAGTTTG TAGTTTGTGT TTTGCACAAA CCAAAACTGC TTATTTTAGA TGAGCCTTTT
TCTGGATTTG ATCCTGTAAA TGCCAATGTT ATTAAAGATG AAATTCTGGC ATTAAAAGAA
CAAGGTTCTA CTATAATTTT TTCTACGCAC CGAATGGAAA GCGTAGAAGA GCTTTGTGAA
AACATTGCCT TAATCCACAA ATCAAATAAA TTAATTGAGG GAAAAGTTGT TGATGTAAAA
CGTCAATTTA GAACGAACAG TTTTGAAGTG GGAATCCTGA CAAATAATGT TGAAGGTTTG
ATGTATGACA TTACACAAAA ATTTACTGTT TCTCCTGCGA GTTTTAAATC TTTAAATGAT
GATTTAAAAT TGAATATTCA AATAGGAAAT GCTTCACCAA ACGAATTATT AAATGTTTTG
ACGCAGCGCG GACAAGTAAC ACATTTCGTG GAAAAAATTC CAAGCATTAA CGATATTTTT
ATTCAGACTG TTACAGAAAA TAAAGTTTAG
 
Protein sequence
MSNLLEVHKV VKQYGDYVAL NEVSLNVPKG SIYGLLGPNG AGKTSLIRII NQITLPDSGE 
IILDGEKLQP KHVQTIGYLP EERGLYSSMR VGEQCLYLAQ MKGLSKAEAK KQLDYWFDRL
GIQGWWNKKI QELSKGMAQK IQFVVCVLHK PKLLILDEPF SGFDPVNANV IKDEILALKE
QGSTIIFSTH RMESVEELCE NIALIHKSNK LIEGKVVDVK RQFRTNSFEV GILTNNVEGL
MYDITQKFTV SPASFKSLND DLKLNIQIGN ASPNELLNVL TQRGQVTHFV EKIPSINDIF
IQTVTENKV