| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_5025 |
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| Symbol | |
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| ID | 5092169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 6063510 |
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| End bp | 6064895 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644744450 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001197343 |
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| Protein GI | 146302752 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.274377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATTTAA AGCAGTACAC AAAAGAATTT TCATATAATT TTAAACTTGC CTATCCTGTT
ATTTTAGGAA TGGTTGGCCA TACTTTAATT GGTATTGTCG ACAATATAAT GGTAGGGAAA
ATTGGCAGTA CAGAATTAGC AGCAGTTTCA TTAGGAAACA GCATGATTTT TATTGCAATG
TCTCTGGGAA TTGGTTTTTC TACTGCCATA ACTCCAATTG TAGCCGAAGG CGATGCAGAA
AAAAATGACA GTAAAATTCG TTCTGCTTTT CACCACGGAT TATTTTTATG CACCATTTTA
GGACTAGTGC TTTTTACTGT AATCATGTTT GCAAAACCTA TAATGGAATT ATTAAAACAG
CCTGCAGATG TTATTGTTCT GGCAAAACCT TATTTGGGCT GGGTAGCTTT TTCGTTGATT
CCTTTAATTA TGTATCAGGG ATATAAGCAA TTTGCAGACG GAATGTCTCT TACCAAATAT
TCTATGTATG CCATGGTTAT GGCAAACGTG CTGCACGTAG GGTTAAACTA TGTTTTAATT
TACGGAATCT GGATTTTTCC AAAAATGGGA ATTATTGGGG CGGCATTGGG AACTGTGATT
TCGAGAATAT TTTTGGTAAT GTTTATGCAT ATAATGTTGT CAAGAAGAGA CGATTTAAAA
CGTTTCTTTA AAGGTTTCAG TTTTGATGAA ATCAAAAAAG CAACGATCAA AAAAATCATC
AGCATTGGAT TTCCATCGGC AATGCAAATG TTGTTTGAAG TAGTTTTGTT TACCGCTTCT
ATATGGCTTT GCGGTAATAT TGGAAAAACC AGTCAGGCCG CTAATCAGAT TGCTTTAAGT
CTGGCTTCGA TGACTTTTAT GTTTGCAATG GGATTGAGCG TCACTTCGAT GATCAGGGTC
AGCAACCAAA GAGGATTAAA CGATTATAAA AAGCTGATTG TCGTAGCCCG TTCTATTTTC
TTACTGGCAA TTATACTCGA AACTTTCTTT GCACTTCTAT TTATAGTATT CCATAATTAT
CTGCCGCATA TGTTTTTAAA TATGGAAAAT ACAGGACAGG TTCTGGATAA TACCGAAGTA
ATTGCAATTG CATCAAAACT GCTTTTAATT GCGGCTGTTT TCCAAATTTC TGATGGAATT
CAGGTTGTAG TTTTGGGCGC TCTGCGTGGC TTACAGGATG TAAAAGTGCC TATGTATATT
ACATTTGTGG CTTATTGGAT CATTGGTTTT CCTATTTCAT ATTATTTAGG AGAGCATACA
GAACTAAAAG CGCAAGGCGT TTGGATAGGA CTTTTGGCAG GTTTAACAGC AGCAGCAATT
TTTCTGTATA TTCGCTTTCA TTTTCTAACG AAGAAGTTAA TCGCAAATTC ACCTTTAAAT
AATTAA
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| Protein sequence | MNLKQYTKEF SYNFKLAYPV ILGMVGHTLI GIVDNIMVGK IGSTELAAVS LGNSMIFIAM
SLGIGFSTAI TPIVAEGDAE KNDSKIRSAF HHGLFLCTIL GLVLFTVIMF AKPIMELLKQ
PADVIVLAKP YLGWVAFSLI PLIMYQGYKQ FADGMSLTKY SMYAMVMANV LHVGLNYVLI
YGIWIFPKMG IIGAALGTVI SRIFLVMFMH IMLSRRDDLK RFFKGFSFDE IKKATIKKII
SIGFPSAMQM LFEVVLFTAS IWLCGNIGKT SQAANQIALS LASMTFMFAM GLSVTSMIRV
SNQRGLNDYK KLIVVARSIF LLAIILETFF ALLFIVFHNY LPHMFLNMEN TGQVLDNTEV
IAIASKLLLI AAVFQISDGI QVVVLGALRG LQDVKVPMYI TFVAYWIIGF PISYYLGEHT
ELKAQGVWIG LLAGLTAAAI FLYIRFHFLT KKLIANSPLN N
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