Gene Fjoh_5020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_5020 
Symbol 
ID5092164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand+ 
Start bp6058418 
End bp6059059 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content37% 
IMG OID644744445 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001197338 
Protein GI146302747 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0420481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCG CAATTATTGG AGCAACAGGA TTTGTTGGCT CAGCAATTTT AAACGAATTG 
GCAGACAGAA AACATGATAT TACAGCTATT GCAAGAAACC CAAAAGACAC AGCAAATGTG 
ACATGGAAAA GTGCTGATAT ATTTAATGTA AATGAATTGG CAGAAATTTT AAAAGGAAAT 
GATGCTGTTA TCAATGCGTA TAATTCAGGA TGGACAAACC CAAACATTTA TGATGATTTT 
ATTGCCGGAT CAAAAGCCAT TCAGGAAGCG GTAAAAAAAT CAGGTGTAAA ACGTTACATC 
ACAATTGGCG GTGCGGGCAG TTTATTTGTA GCTCCGGGTT TACAAGCGGT TGACACACCA 
GATTTTCCAA AAGAATATCA CGCAGGTGCT ACGGCAGCAA GAGATTATTT AAATATCCTA 
AAAGAAGAAA AAGAATTAGA CTGGGCATTT TTCAGCCCGG CATTTGAAAT GCATCAGGGA 
ATTACAACCG GAAGAACAGG AAAATACCGT TTAGGTTTAG AAAATCCTGT TTTTAATGAT 
GAGCAAAGAA GTATTTTATC TGTAGAGGAT TTAGCAGTTG TTATTGCTGA TGAAGCAGAA 
AATCCAAAAC ACCACCAGGT TAGATTTACA GCGGCTTATT AA
 
Protein sequence
MKIAIIGATG FVGSAILNEL ADRKHDITAI ARNPKDTANV TWKSADIFNV NELAEILKGN 
DAVINAYNSG WTNPNIYDDF IAGSKAIQEA VKKSGVKRYI TIGGAGSLFV APGLQAVDTP 
DFPKEYHAGA TAARDYLNIL KEEKELDWAF FSPAFEMHQG ITTGRTGKYR LGLENPVFND 
EQRSILSVED LAVVIADEAE NPKHHQVRFT AAY