| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_5015 |
|---|
| Symbol | |
|---|
| ID | 5092159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 6052158 |
|---|
| End bp | 6053504 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644744440 |
|---|
| Product | adenylosuccinate lyase |
|---|
| Protein accession | YP_001197333 |
|---|
| Protein GI | 146302742 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0015] Adenylosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTACTC TAAACGAATT GAATGCTATA TCGCCAATTG ACGGAAGATA TAGAAATAAA
ACTCAAAATT TAGCACCTTT CTTTTCTGAA GAAGCTTTAA TAAAATACCG TGTATTAGTT
GAAATTGAAT ATTTCATCGC TTTATGCGAA ATTCCTTTAC CACAGCTTTC TGGCGTAAAT
TCAGATTTAT TCGACAGTTT GAGAAACATC TACAAAAATT TCTCTACTGA AGATGCGCTT
TGGATTAAAG AAACAGAAAA AGTAACCAAC CACGACGTAA AAGCGGTTGA ATACTTTATT
AAAGATGCTT TCGAAAAATT AGGTTTGTCT CAATACAAAG AGTTCATTCA CTTCGGATTA
ACATCTCAGG ATATTAACAA TACTGCAATT CCTCTTTCTA CAAAAGAAGC TTTTGAACAA
GTTTATATGC CGTCTTTAGT AGCTTTAATT GCTAAACTAA AAGAATTAAG CGTTGAATGG
AAAGATATTC CGATGCTTGC CCGTACACAT GGACAACCGG CTTCTCCTAC TCGTTTAGGA
AAAGAAATTC TTGTTTTTGT AGAGCGTTTA GAAGAGCAGA TGCGTTTGTT ATTCAATATT
CCGTTTGCTG CTAAATTTGG CGGTGCAACC GGAAACTTTA ATGCACACCA TGTTGCATAC
CCGCAGATTG ACTGGAAAAA ATTTGGTGAT AAATTTGTTG AAACTGATTT AGGCTTACAC
CACTCTTTTC CAACAACTCA AATTGAGCAT TACGATCATT TTGCTGCTTT TTTTGATGGT
TTAAAAAGGA TCAACAATAT CATTATCGAT TTAGACCGTG ATATCTGGAC GTATGTTTCA
ATGGATTATT TTAAACAAAA AATCAAAGCA GGAGAAATTG GTTCATCTGC AATGCCTCAT
AAAGTAAACC CAATTGATTT TGAAAATTCT GAAGGAAACT TAGGAATTGC TAATGCTATT
TTCGAACATT TAGCGGCTAA ACTTCCAATT TCAAGATTAC AGCGTGATTT AACTGACAGT
ACAGTTTTGC GTAATGTTGG TGTACCGGTT GGACATACTA TTATTGCTTT TGAAGCTACT
CTTAAAGGTT TAAACAAATT ACTTTTAAAC GAAAGCAAGT TTGCTGAAGA CTTAGAAAAA
AACTGGGCAG TTGTGGCAGA AGCTATTCAA ACAATCTTAC GTCGTGAAGC TTATCCAAAC
CCATACGAAG CTCTAAAAGG TTTAACAAGA ACTAATGAAG CAATTGATAA AAATGCGATT
CATAATTTCA TTGCAACTTT AGAAGTTTCT GACGCAGTTA GAGCAGAATT AATGCAGATA
ACTCCTAGCA ATTACACAGG AATTTAA
|
|---|
| Protein sequence | MTTLNELNAI SPIDGRYRNK TQNLAPFFSE EALIKYRVLV EIEYFIALCE IPLPQLSGVN
SDLFDSLRNI YKNFSTEDAL WIKETEKVTN HDVKAVEYFI KDAFEKLGLS QYKEFIHFGL
TSQDINNTAI PLSTKEAFEQ VYMPSLVALI AKLKELSVEW KDIPMLARTH GQPASPTRLG
KEILVFVERL EEQMRLLFNI PFAAKFGGAT GNFNAHHVAY PQIDWKKFGD KFVETDLGLH
HSFPTTQIEH YDHFAAFFDG LKRINNIIID LDRDIWTYVS MDYFKQKIKA GEIGSSAMPH
KVNPIDFENS EGNLGIANAI FEHLAAKLPI SRLQRDLTDS TVLRNVGVPV GHTIIAFEAT
LKGLNKLLLN ESKFAEDLEK NWAVVAEAIQ TILRREAYPN PYEALKGLTR TNEAIDKNAI
HNFIATLEVS DAVRAELMQI TPSNYTGI
|
|---|
| |