Gene Fjoh_4987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4987 
Symbol 
ID5094257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp6022977 
End bp6023747 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content36% 
IMG OID644744412 
Productexonuclease, RNase T and DNA polymerase III 
Protein accessionYP_001197305 
Protein GI146302714 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAA AACTTAACAA ACCAATCTGC TTTTTTGACC TTGAAACAAC TGGAATTGAT 
ATCGGTAAAG ATCGAATAGT AGAAATTTCG ATATTTAAAG TTTTTCCAAA CGGAAATAAA
GAAAGTAAAA CCTGGCTGGT TAATCCAACA ATTCCAATTC CTCCACAAAC TACGGCGGTT
CACGGCATTA CTGATGAAAA GGTAGCCAAC GAACCAACCT TTGCCGAACT TGCTCCGCTG
GTTCATAATA TGATAAAAGA CAGCGATCTT GCAGGTTTTA ATTCAGATCG TTTTGATATT
CCGCTGCTGG CAGAAGAACT GCTTCGTGCC GGAGTTGATT TTGATATGAA AAATAAAGTT
TCGGTAGATG TTCAGACTAT TTTTCATAAA ATGGAAGAGC GTACATTAAG TGCGGCTTTA
AAGTTTTACT GCGGAAAAAG TCTTGATAAT GCACACTCTG CAGAAGCGGA TACAATGGCA
ACTTACGAAA TTTTAAAAGC GCAGTTAGAT CGTTATCCGG AATTAGAAAA CGATATGAAA
TCATTGTCTG AGTTTACAAC TCGTAAACGA ATTGCTGATT TTGCCGGAAT GATCGCTTTT
GATAATGATG ATGAAGAAAT CTTTACTTTC GGAAAACACA AAGGGGCAAA AGTTGAAAAA
GTACTGGAAA CAGAGCCTGG ATATTTCAGC TGGATTCAAA ACGCCGATTT TCCTTTGTAC
ACCAAAAAAG TTCTGACAGG GATTAAATTG AGAAAATTAA ATACAAAATA A
 
Protein sequence
MELKLNKPIC FFDLETTGID IGKDRIVEIS IFKVFPNGNK ESKTWLVNPT IPIPPQTTAV 
HGITDEKVAN EPTFAELAPL VHNMIKDSDL AGFNSDRFDI PLLAEELLRA GVDFDMKNKV
SVDVQTIFHK MEERTLSAAL KFYCGKSLDN AHSAEADTMA TYEILKAQLD RYPELENDMK
SLSEFTTRKR IADFAGMIAF DNDDEEIFTF GKHKGAKVEK VLETEPGYFS WIQNADFPLY
TKKVLTGIKL RKLNTK