Gene Fjoh_4925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4925 
Symbol 
ID5094195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5945019 
End bp5945600 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content34% 
IMG OID644744348 
ProductTetR family transcriptional regulator 
Protein accessionYP_001197243 
Protein GI146302652 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAGAA CGAAAGAATT TAATGAAGAT CAGGTTTTAG ATAAAGCAAT TGAAATTTTT 
TGGCACAAAG GTTATAACGG AACTTCTGCT CAGGATTTGG TAAATCATTT AGGATTAAGC
CGTTCGAGTT TGTATGATAC TTTTGGAGAT AAACAGAAAC TGTTTGCCAG AGCTTTAAAA
AAATATCATG ATGAAAATTA CATTAAGATT AAAGAAATAC TCGAAACGGC CACAAATATA
AAAGAAACAC TTAGCGTAAT TTTTAAGCTG GCTGTAGTAG AAAGTCTCGA AGACCGAATT
ACTAAAGGTT GTTTTATGGT AAATTCAGCT GTAGAACTTG CTATGCATGA TGCTGATATC
GCAAAAATTG TAAACGATAA CCGAAAAATC ATGGAAGAAG TTTTTTATAT GGCTGTAAAA
AAAGGGCAGG AGCTGGGACA GATTTCGTCT AAGCAAGAAG CCAGATCTTT AGCTCGTTTT
ATTTTTAACA ATTACTCCGG AATAAGGGTT TTGGCGAGAG CAGGCGAGAG AGACAAACAA
GTTTATGATG ATATTTTAAA ATCGATTTTC GCATTGTTTT AG
 
Protein sequence
MARTKEFNED QVLDKAIEIF WHKGYNGTSA QDLVNHLGLS RSSLYDTFGD KQKLFARALK 
KYHDENYIKI KEILETATNI KETLSVIFKL AVVESLEDRI TKGCFMVNSA VELAMHDADI
AKIVNDNRKI MEEVFYMAVK KGQELGQISS KQEARSLARF IFNNYSGIRV LARAGERDKQ
VYDDILKSIF ALF