Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4925 |
Symbol | |
ID | 5094195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 5945019 |
End bp | 5945600 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644744348 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001197243 |
Protein GI | 146302652 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAGAA CGAAAGAATT TAATGAAGAT CAGGTTTTAG ATAAAGCAAT TGAAATTTTT TGGCACAAAG GTTATAACGG AACTTCTGCT CAGGATTTGG TAAATCATTT AGGATTAAGC CGTTCGAGTT TGTATGATAC TTTTGGAGAT AAACAGAAAC TGTTTGCCAG AGCTTTAAAA AAATATCATG ATGAAAATTA CATTAAGATT AAAGAAATAC TCGAAACGGC CACAAATATA AAAGAAACAC TTAGCGTAAT TTTTAAGCTG GCTGTAGTAG AAAGTCTCGA AGACCGAATT ACTAAAGGTT GTTTTATGGT AAATTCAGCT GTAGAACTTG CTATGCATGA TGCTGATATC GCAAAAATTG TAAACGATAA CCGAAAAATC ATGGAAGAAG TTTTTTATAT GGCTGTAAAA AAAGGGCAGG AGCTGGGACA GATTTCGTCT AAGCAAGAAG CCAGATCTTT AGCTCGTTTT ATTTTTAACA ATTACTCCGG AATAAGGGTT TTGGCGAGAG CAGGCGAGAG AGACAAACAA GTTTATGATG ATATTTTAAA ATCGATTTTC GCATTGTTTT AG
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Protein sequence | MARTKEFNED QVLDKAIEIF WHKGYNGTSA QDLVNHLGLS RSSLYDTFGD KQKLFARALK KYHDENYIKI KEILETATNI KETLSVIFKL AVVESLEDRI TKGCFMVNSA VELAMHDADI AKIVNDNRKI MEEVFYMAVK KGQELGQISS KQEARSLARF IFNNYSGIRV LARAGERDKQ VYDDILKSIF ALF
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