Gene Fjoh_4904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4904 
Symbol 
ID5094174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5925668 
End bp5927257 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content38% 
IMG OID644744327 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001197222 
Protein GI146302631 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAG CAGTACAAGC AGACGACGAT TTAGTAGAAT ACGGTTTCAG ACGTGTTATC 
ATTACGATTA CAGCAGTGCT TTGTGCACTG TTGGAAATTG TAGATACTAC GATTGTAAAC
GTAGCGCTGA CAGACATGCG CGGAAGTCTT GGTGCTACCT TGACTGATGT GGCATGGGTT
ATTACAGCAT ACGCAATTGC GAATGTTATT GTAATTCCGA TGACGAGCTG GCTATCACAG
CAATTTGGAA GACGTAATTA TTTTGTGGCC TCCATTATAA TATTTACGGT CTGTTCTTTT
TTGTGTGGTA ATGCCACAAA TATTTGGGAA CTTGTAGCTT TCCGATTCGT ACAAGGTATG
GGCGGTGGAG CATTACTGGT AACAGCCCAA ACGATTATTA CAGAAAGTTA TCCCGTAGCA
AAACGTGGAA TGGCACAGGC TATTTACGGA ATGGGTGTAA TTGTAGGTCC AACTTTAGGT
CCGCCTTTGG GAGGATATTT AGTAGATAAT TACTCTTGGC CTTATATATT TTACATCAAT
ATTCCGTTGG GAATTATTGC CACTATTTTG GCTTTAACAT TTGTTAGAAG TCCGAAATAT
GGAGAAAAAT TAAAAGCCAA TCAGGTTGAC TGGTGGGGAA TTATTCTGTT GAGTACCTTT
ATTGGTTCTT TACAATTCGT ATTAGAACAC GGGCAGCAAG ACGACTGGTT TAACGATTCA
TTAATCGTAA CCTTAAGTGT TGTTACCGTT CTTGGATTGG TTTTATTTAT CTGGAGAGAG
CTTACTTATA AACATCCAAT CGTAAACTTA AGTGTTTTAA AAGACGGAAA CTTAAGAATT
GGAACCGTAA TGTGTTTTAT TCTTGGTTTC GGTTTATACG GATCAACATT GATTATTCCA
ATTTACACGC AGTCAATTTT AGGATGGACT GCAACTGATG CAGGTTTATT ATTAATTCCG
GGATCTATTA CAACGGCAAT TATGATGCCT TTTGTTGGAA ATATGATTCA GAAAGGTGTA
CCGCAAGGAT ATATGGTTGG AGTAGGATTT TTAATTTTCT TCTTCTTTAC TTTCATGATG
TACAGCCGAA TGACGCCTGA TACTGGAGTT GAACATATGT ACTGGCCTTT AATTTTGAGA
GGAATTGGTC TAGGATTACT TTTCGTTCCT ATTACAACAC TTTCTCTTTC AACTTTAAAA
GGAAAACAAA TTGGTGAAGG AGCAGCATTT ACAGGAATGA TGCGTCAGTT AGGCGGATCA
TTTGGTATTG CGATTATTAC CACTTTCATC ACTCGTTTCA GTCAGTCACA CAGAGTAGAT
TTAATTAATA ATTTAGATCC GGCGAAATTT GAAGTGCAAC AGCGAATTGC AGGAATGCAG
CACGCGTTCA TGGCAAAAGG ATATAGCGCA GATGTTGCTT TGAAAAAAGC ATATCAGGCT
ATAGAGTATT CTGTAATGAA ACAAAGTACT GTAATGGCTT ATATGGATAT TTTCCTTTAT
CTGGGAATCA TGTTTTTATG TTGCATACCG ATTATTCTCT TTATCAAAAA AGGGAAAAAC
AAAATTAGTG CAGCCGACGC AATGCATTAA
 
Protein sequence
MAGAVQADDD LVEYGFRRVI ITITAVLCAL LEIVDTTIVN VALTDMRGSL GATLTDVAWV 
ITAYAIANVI VIPMTSWLSQ QFGRRNYFVA SIIIFTVCSF LCGNATNIWE LVAFRFVQGM
GGGALLVTAQ TIITESYPVA KRGMAQAIYG MGVIVGPTLG PPLGGYLVDN YSWPYIFYIN
IPLGIIATIL ALTFVRSPKY GEKLKANQVD WWGIILLSTF IGSLQFVLEH GQQDDWFNDS
LIVTLSVVTV LGLVLFIWRE LTYKHPIVNL SVLKDGNLRI GTVMCFILGF GLYGSTLIIP
IYTQSILGWT ATDAGLLLIP GSITTAIMMP FVGNMIQKGV PQGYMVGVGF LIFFFFTFMM
YSRMTPDTGV EHMYWPLILR GIGLGLLFVP ITTLSLSTLK GKQIGEGAAF TGMMRQLGGS
FGIAIITTFI TRFSQSHRVD LINNLDPAKF EVQQRIAGMQ HAFMAKGYSA DVALKKAYQA
IEYSVMKQST VMAYMDIFLY LGIMFLCCIP IILFIKKGKN KISAADAMH