| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4899 |
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| Symbol | trpA |
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| ID | 5094169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 5920021 |
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| End bp | 5920782 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644744322 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001197217 |
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| Protein GI | 146302626 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.293143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAGAA TAACTCAAAA ATTACAAGAA GATAAAAAGA TCCTTTCGAT CTATTTTTCT
GCGGGATATC CAAATTTAAA TGATACCGTG CAGATTATTC AGGATTTAGA AAAAAACGGA
GTTGATTTAA TCGAAATCGG ACTTCCTTTC AGTGATCCTT TGGCAGACGG ACCAACTATT
CAGGCGAGTT CTACACAGGC ACTTCATAAC GGAATGACAA CTCAAATTCT TTTTGATCAG
CTGCAAAACA TCCGCGAAAG CGTAAAAATT CCATTAATCA TTATGGGATA TTTCAACCCG
ATGTTACAAT ACGGAGTTGA AGCTTTCTGC AAAAAATGTG CTGAAATTGG TATTGATGGT
CTAATTATCC CAGATCTTCC GGTTGATGTT TATGCAGATG AATACAAAGC AATTTTCGAA
AAATACGGTT TAATTAATGT ATTCCTAATT ACACCTCAAA CTTCAGATGA ACGTATTCGT
TTTATAGACA GCGTTTCAAA CGGATTTATT TATATGGTAA GTTCTGCAAG TGTTACAGGA
TCACAAAGTG GTTTTGGAAA TGTTCAGGAA ACCTATTTTG AAAGAATTTC AAATCTAAAT
TTAAAAAATC CTCAAATTGT TGGTTTTGGA ATTTCAAATA AAGAAACTTT TAACCAAGCC
ACTAAATATG CAAAAGGAGC TATTATTGGA AGTGCTTTTA TCAAACATTT AAGCGAAAGC
GGCAGTGGGA AAATTCAAGA GTTTGTTGGA GAGATTCGAT AA
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| Protein sequence | MNRITQKLQE DKKILSIYFS AGYPNLNDTV QIIQDLEKNG VDLIEIGLPF SDPLADGPTI
QASSTQALHN GMTTQILFDQ LQNIRESVKI PLIIMGYFNP MLQYGVEAFC KKCAEIGIDG
LIIPDLPVDV YADEYKAIFE KYGLINVFLI TPQTSDERIR FIDSVSNGFI YMVSSASVTG
SQSGFGNVQE TYFERISNLN LKNPQIVGFG ISNKETFNQA TKYAKGAIIG SAFIKHLSES
GSGKIQEFVG EIR
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