| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4861 |
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| Symbol | |
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| ID | 5094299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 5881471 |
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| End bp | 5882910 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644744284 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001197179 |
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| Protein GI | 146302588 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAAG TTAAAACATA TCAATACAGT ATTGCATTGG GCTTATGTCT TGCCGTGGCA
GGATGTAAAG CTCCTGCAGC TGAAACAGCA AGTACAAGTG CTCCTGTTCC TGAAGCATTT
GGAAACGTTA AATCTCAGGA TACAACTAAT ACTGCAGCCT TAAAATGGAA AGATTTCTTT
AAGGATCAAA ATTTAGTTGA ACTAATCGAT ATTGCGCTGA AAAACAATCA GGAACTGAAT
ATGACTTTGC AGGAAATTGA AATTGCAAAG AATGATATCA GAGTTCGTAA AGGCGCTTTA
CTGCCAACAG TTGGTGTTCG TGCCGGTGCA GGAATCGAAA AAGTGGGTAG ATATACAAGT
CAGGGAGCAG GTGATGCTAC AACAGAAATA AAACCTGGAG TAGAAACACC AGATCCATTA
CCGGATTATA CCATTGCTGC TTATGCAAAT TGGGAAGTAG ATATCTGGAA AAAACTGCGT
AATTCTAAAA AGGCAGCTGT AAACCGTTAT TTAGCTACAG TTGAAGGTAA AAACTTTGTA
ATTACAAACT TAATTGCTGA AATCGCTGAT TCTTATTATG AATTATTAGC TTTAGACAGC
CAATTGGAAA TCGTAAAACA GACAATTGAA TTACAGAGCA ATGCTTTGGA AATTGTAAAA
GTTCAGAAAC AAGCAGCTAG AGCTACAGAA CTTGGAGTTC AGAAGTTTCA GGCTGAGGTT
TTAACTTCAA AAAGTTTAGA GTTTGATATT CTTCAGAAAA TTAAAGAAAA CGAAAACAAA
ATCAACTTTT TGTTAGGACG TTATCCACAG GAAATAAAAA GAGAGAAAAC CAATTTTACA
GACTTGCTTC CGGCAGTTGT AAACTCTGGA ATTCCATCTC AGTTACTTGC AAATCGTCCA
GATGTTAAAC AGGCCGAATT AGAGTTAGTA GCTGCAAAAC TAGATGTAAA AGTAGCAAAG
GCTGAATTTT ATCCTTCATT GGATATTTCT GCTGCTTTTG GAGTTCAGGC TTTTAAACCT
TCTTATTTGT TTACATTCCC TGAGTCAATT TTGTATTCAT TAGCAGGAGA TCTTGCTGCG
CCGCTTATTA ATAGAAATGC TATTAAAGCA GAGTTTTCAA GCGCTAATGC AAGACAGCTT
CAGGCTTTGT ACAATTACGA TAAAACAATT TTGAATGCAT ATTTAGAAGT TTCAACACAA
CTTTCTAAAA TCGAAAATCT TCAAAAAGGT TACGATTTAA AATCACAGCA GGTTGATGCT
TTAAATAGAT CAATTGATGT TTCAAATGAT TTGTTTAAAT CTGCGAGAGT AGATTATTTT
GAAGTTTTGA TGACGCAGAG AGATGCATTA GAAGCAAAAC TTGAATTAAT CGACACTAAA
AAAGAACAAT TAAATGCTGC GGTTCATGTT TACAGAGACC TGGGCGGCGG ATGGAAATAA
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| Protein sequence | MYKVKTYQYS IALGLCLAVA GCKAPAAETA STSAPVPEAF GNVKSQDTTN TAALKWKDFF
KDQNLVELID IALKNNQELN MTLQEIEIAK NDIRVRKGAL LPTVGVRAGA GIEKVGRYTS
QGAGDATTEI KPGVETPDPL PDYTIAAYAN WEVDIWKKLR NSKKAAVNRY LATVEGKNFV
ITNLIAEIAD SYYELLALDS QLEIVKQTIE LQSNALEIVK VQKQAARATE LGVQKFQAEV
LTSKSLEFDI LQKIKENENK INFLLGRYPQ EIKREKTNFT DLLPAVVNSG IPSQLLANRP
DVKQAELELV AAKLDVKVAK AEFYPSLDIS AAFGVQAFKP SYLFTFPESI LYSLAGDLAA
PLINRNAIKA EFSSANARQL QALYNYDKTI LNAYLEVSTQ LSKIENLQKG YDLKSQQVDA
LNRSIDVSND LFKSARVDYF EVLMTQRDAL EAKLELIDTK KEQLNAAVHV YRDLGGGWK
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