Gene Fjoh_4845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4845 
Symbol 
ID5094283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5865218 
End bp5866924 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content31% 
IMG OID644744268 
Productputative signal transduction histidine kinase 
Protein accessionYP_001197163 
Protein GI146302572 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.415309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGTT CCCCGTTTTT TTATGTAGTT ATTATACTCT CTTTTATTTC TTGCAAAGAG 
AAAACACCTG CATTGATTAA GCCCAATATC TCCAAAAAAA CGGCTAAACT TATGCAGGAA
AAAGCACTGA ATGAACTTGA AAAAAGTAAT TACAACAGCT CATTTTATTA TTTTAATAAA
TCAAAAGTAA TATTTGAAGC CGCAAAAGAC AGCTCAAATA TAGTTTTCAA CTTACTTCAA
ATGGCCACCA TTCAACAAAT AAATGGTGAT TATTATGGCA GTAAAGAGAC TTTAACCGAA
GCATTACCTT TCTTTAAAAA AAACGATGAC TATAAAGCTC CAGTTAATAA TCTGTTTGGT
ATTGCAGACA AAGAACTTTC ACTTTATGAT GATGCCGTAT TTTATTACAA TGAAGCTTTA
AAAGATGCTA AAGATGAGGC ATCAAGACAA TCTCCGTTAA ACAATATTGC CGTTATTTAC
ATTAAGCAGA AAAAATACGA TAAGGCAATT AAAATTTTAG AATCCATTTT AGACACAAAA
GCACTTGATG AATTTGTAAA AAGTAAATCG AGAGTTATGG ACAATCTTGG ATTTGCTTAT
TTTAAAAAAG GAATTAAGGA TAAAAGTCTT CAGTTTCTAA ATGAAGCATT AAAATTAAGA
ATACAAGCTG ATGACTCTTA TGGAAGTATT GGAAGTTACC TACATCTGGC AGAATTTTAC
TCAGAAACCG ATCTCCAAAA ATCAAATAAA TATGCTGAAA AGGCCTATCA AACAGCCAGT
AAATTAAACA GCGTAGATGA ACGTCTAAAA TCGCTCGCAA TTTTAATTTC TAATGGATCA
GGTACAATAT ATTCAAAAAA ATATATAGCA ATAAACGACA GCATCACAAA TATCCGCAAC
AACTTTAAAA ACAAATTCGC AAAAATTAAA TACGATTCGA AAAAGGAAAA AGATGAAAAC
CAAAAACTTC GACTAGAAAA AGCTGAAAAT TTAGTAGCGC TGAAAGAAGC CGAAAAAGAT
AAAGTAATCT TATTTGCCAC CATAATTGCC ACTTTAATTT CTCTTGTGTC ATTAGGTCTT
TATCTAAGAA AACGTTACAA ACACAAAACT CGACTTGTTG CTATAAAAAC AGCATATAAC
ACCGAAACCC GAATTGCCAA AGACATTCAT GACGGATTAG CAAATGATGT TTTTCATGCG
ATAACATATA CACAAACTCA GCCCTTAACC AACGACAATA ACAAAGAAAA CCTGTTACAA
AAACTCGATG ATATTTATTC ACGAGTACGC GGAATTTCTC GTGAAAATAA TGATATCAAT
ACCGGACCTA ATTACCCCAA TTATTTAAAG GAAATGCTTT CTACCTATAA TAGTCCTCAA
ACAAACGTTA TTATTAATAG TATCGAAAAA ATAAATTGGG ATTCGGTTGA AGATTTAAAA
AAGATTGCCA TTCAGCGTGT ATTACATGAA TTAATGGTTA ATATGAAAAA ACACAGCGAA
GCTTCTATCG TTGTTATAAA ATTTGAAAGC AGTTCAAATA CCTTATTTAT AAATTACTCG
GATAATGGAA AAGGCTGCGA AAAATCAAAA ATTATCAAAA ATGGTCTGCA AAATATGGAA
ATCCGTATTC TAGCCATAAA GGGAACTATT ACTTTTGAAA CTGAACCAGA TAAAGGTTTT
AAAGTAAAAA TAACAATGCC TAAATAA
 
Protein sequence
MLRSPFFYVV IILSFISCKE KTPALIKPNI SKKTAKLMQE KALNELEKSN YNSSFYYFNK 
SKVIFEAAKD SSNIVFNLLQ MATIQQINGD YYGSKETLTE ALPFFKKNDD YKAPVNNLFG
IADKELSLYD DAVFYYNEAL KDAKDEASRQ SPLNNIAVIY IKQKKYDKAI KILESILDTK
ALDEFVKSKS RVMDNLGFAY FKKGIKDKSL QFLNEALKLR IQADDSYGSI GSYLHLAEFY
SETDLQKSNK YAEKAYQTAS KLNSVDERLK SLAILISNGS GTIYSKKYIA INDSITNIRN
NFKNKFAKIK YDSKKEKDEN QKLRLEKAEN LVALKEAEKD KVILFATIIA TLISLVSLGL
YLRKRYKHKT RLVAIKTAYN TETRIAKDIH DGLANDVFHA ITYTQTQPLT NDNNKENLLQ
KLDDIYSRVR GISRENNDIN TGPNYPNYLK EMLSTYNSPQ TNVIINSIEK INWDSVEDLK
KIAIQRVLHE LMVNMKKHSE ASIVVIKFES SSNTLFINYS DNGKGCEKSK IIKNGLQNME
IRILAIKGTI TFETEPDKGF KVKITMPK